Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07645 and IAI47_07650 are separated by 252 nucleotidesIAI47_07650 and IAI47_07655 are separated by 18 nucleotidesIAI47_07655 and IAI47_07660 are separated by 1 nucleotidesIAI47_07660 and IAI47_07665 are separated by 61 nucleotides IAI47_07645: IAI47_07645 - Lrp/AsnC family transcriptional regulator, at 1,619,399 to 1,619,908 _07645 IAI47_07650: IAI47_07650 - GNAT family N-acetyltransferase, at 1,620,161 to 1,620,607 _07650 IAI47_07655: IAI47_07655 - hydantoinase/oxoprolinase family protein, at 1,620,626 to 1,622,671 _07655 IAI47_07660: IAI47_07660 - hydantoinase B/oxoprolinase family protein, at 1,622,673 to 1,624,631 _07660 IAI47_07665: IAI47_07665 - thiamine pyrophosphate-requiring protein, at 1,624,693 to 1,626,474 _07665
Group Condition IAI47_07645 IAI47_07650 IAI47_07655 IAI47_07660 IAI47_07665
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -1.2 -0.2 -0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.7 -0.0 +0.1 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.5 -0.3 +0.0 -0.1
stress Uranyl Acetate Dihydrate 200 uM, anaerobic -0.2 -0.3 -0.2 -0.4 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.1 -0.1 -0.5
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.3 +0.1 -0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 +0.1 +0.0 -0.0 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.3 -0.1 +0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.5 +0.0 +0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.5 +0.0 -0.0 +0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.0 -0.2 -0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.2 -0.2 -0.1 +0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 -0.3 -0.2 -0.0 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 +0.2 -0.2 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.4 +0.2 +0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.1 +0.3 -0.4
nitrogen source Ammonium chloride (N) +0.1 +0.3 -0.2 -0.5 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.8 +0.5 +0.0 +0.2 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.2 +0.3 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.6 -0.1 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.6 +0.4 +0.3 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.7 -0.3 +0.0 +0.1
stress copper (II) chloride 2 uM, anaerobic +0.3 +0.6 -0.2 +0.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.0 -0.3 +0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.1 -0.4 -0.0
carbon source Ying_sugar7 rep B; time point 2 +0.3 +0.5 +0.1 -0.2 -0.0
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.7 +0.2 -0.2 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.3 +0.4 -0.2 -0.1 +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.7 +0.1 +0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.1 +0.2 +0.2
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