Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07575 and IAI47_07580 are separated by 158 nucleotidesIAI47_07580 and IAI47_07585 are separated by 446 nucleotidesIAI47_07585 and IAI47_07590 are separated by 28 nucleotidesIAI47_07590 and IAI47_07595 are separated by 10 nucleotides IAI47_07575: IAI47_07575 - HTH-type transcriptional regulator Cbl, at 1,601,761 to 1,602,720 _07575 IAI47_07580: IAI47_07580 - NAD-dependent succinate-semialdehyde dehydrogenase, at 1,602,879 to 1,604,336 _07580 IAI47_07585: IAI47_07585 - aldehyde dehydrogenase, at 1,604,783 to 1,606,252 _07585 IAI47_07590: IAI47_07590 - haloacid dehalogenase type II, at 1,606,281 to 1,606,949 _07590 IAI47_07595: IAI47_07595 - FAD-binding oxidoreductase, at 1,606,960 to 1,608,237 _07595
Group Condition IAI47_07575 IAI47_07580 IAI47_07585 IAI47_07590 IAI47_07595
nitrogen source nitrogen source Ammonium chloride 20mM -1.1 +0.1 -0.1 +0.0 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.4 -0.1 +0.3 -0.3
stress copper (II) chloride 2 uM, anaerobic +0.2 -0.0 -0.3 -0.6 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.2 -0.2 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.3 -0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.2 +0.6 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.3 -0.4 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.3 -0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.1 +0.3 +0.3 -0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 +0.3 -0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 -0.2 +0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.3 +0.1 +0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.4 +0.2 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.4 +0.2 -0.3 +0.2
stress copper (II) chloride 2 uM, anaerobic +0.6 -0.3 +0.0 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.2 -0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.4 +0.3 -0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.1 +0.5 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.1 +0.2 -0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.1 +0.4 +0.3 +0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.2 +0.3 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.1 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.4 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.1 +0.4 +0.3 +0.0 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.5 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.3 -0.1 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.3 +0.2 +0.4 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.3 +0.3 +0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.7 +0.1 +0.5 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.7 +0.4 +0.2
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IAI47_07575
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IAI47_07580
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IAI47_07590
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IAI47_07595
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