Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07100 and IAI47_07105 are separated by 179 nucleotidesIAI47_07105 and IAI47_07110 are separated by 163 nucleotidesIAI47_07110 and IAI47_07115 are separated by 19 nucleotidesIAI47_07115 and IAI47_07120 overlap by 8 nucleotides IAI47_07100: IAI47_07100 - his operon leader peptide, at 1,498,568 to 1,498,615 _07100 IAI47_07105: IAI47_07105 - SDR family oxidoreductase, at 1,498,795 to 1,499,622 _07105 IAI47_07110: IAI47_07110 - FAD-binding oxidoreductase, at 1,499,786 to 1,501,063 _07110 IAI47_07115: IAI47_07115 - HTH-type transcriptional regulator PuuR, at 1,501,083 to 1,501,640 _07115 IAI47_07120: IAI47_07120 - gamma-glutamyl-gamma-aminobutyrate hydrolase, at 1,501,633 to 1,502,400 _07120
Group Condition IAI47_07100 IAI47_07105 IAI47_07110 IAI47_07115 IAI47_07120
stress copper (II) chloride 2 uM, anaerobic N.D. -0.5 -0.3 +0.1 -0.8
carbon source Ying_Others16 rep C; time point 2 N.D. +0.1 -0.6 -0.0 -0.6
carbon source Ying_Others16 rep A; time point 2 N.D. +0.0 -0.3 +0.2 -0.8
no stress control Defined media control, aerobic N.D. +0.1 -0.0 -0.7 -0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.8 -0.2 -0.0 +0.1
carbon source Ying_Others16 rep A; time point 3 N.D. +0.2 -0.4 +0.1 -0.7
carbon source Ying_Others16 rep C; time point 3 N.D. +0.4 -0.5 -0.0 -0.6
nitrogen source Ammonium chloride (N) N.D. -0.5 +0.1 -0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.4 +0.1 +0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.6 +0.1 +0.4 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.3 +0.0 -0.5 +0.3
stress copper (II) chloride 2 uM, anaerobic N.D. -0.4 -0.1 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.4 -0.2 +0.4 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.4 -0.2 -0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.1 -0.1 +0.4 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 +0.2 +0.5 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. -0.1 +0.1 +0.9 -0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 +0.0 +0.6 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 -0.1 +0.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.5 -0.1 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 +0.2 +0.6 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 +0.3 +0.3 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.3 -0.0 +0.5 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 +0.0 +0.9 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.7 -0.0 +0.2 +0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.7 +0.1 -0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. +0.7 +0.0 +0.5 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.7 +0.1 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.2 +0.2 +0.5 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.5 +0.1 +0.6 +0.3
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