Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07035 and IAI47_07040 are separated by 128 nucleotidesIAI47_07040 and IAI47_07045 are separated by 84 nucleotidesIAI47_07045 and IAI47_07050 are separated by 106 nucleotidesIAI47_07050 and IAI47_07055 are separated by 66 nucleotides IAI47_07035: IAI47_07035 - NADP-dependent phosphogluconate dehydrogenase, at 1,485,824 to 1,487,233 _07035 IAI47_07040: IAI47_07040 - acyltransferase, at 1,487,362 to 1,488,453 _07040 IAI47_07045: IAI47_07045 - succinylglutamate desuccinylase/aspartoacylase family protein, at 1,488,538 to 1,489,836 _07045 IAI47_07050: IAI47_07050 - ABC transporter substrate-binding protein, at 1,489,943 to 1,490,734 _07050 IAI47_07055: IAI47_07055 - YbaK/prolyl-tRNA synthetase associated domain-containing protein, at 1,490,801 to 1,491,277 _07055
Group Condition IAI47_07035 IAI47_07040 IAI47_07045 IAI47_07050 IAI47_07055
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -3.9 -0.4 -0.2 -0.9
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.2 -0.4 -0.7 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.5 -0.0 -0.7 -0.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -2.0 -0.1 +0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 N.D. -1.5 -0.2 -0.6 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.0 +0.1 -0.4 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.6 -0.3 -0.6 -0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.3 -0.0 -0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.3 -0.5 -0.5 -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.0 +0.0 -0.4 -0.5
survival Survival; Treatment=UGA synthetic gw pH3.9; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.6 +0.1 -0.6 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.4 -0.4 +0.1 -0.0
no stress control Defined media control, anaerobic N.D. -1.6 +0.1 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.1 -0.5 -0.1 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.1 +0.1 -0.1 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.2 -0.2 -0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 N.D. -1.0 -0.2 -0.4 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.3 +0.1 -0.1 -1.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.0 -0.1 +0.4 +0.2
stress copper (II) chloride 2 uM, anaerobic N.D. -0.6 +0.2 -0.8 +0.8
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.7 -0.1 -0.0 -0.9
stress Uranyl Acetate Dihydrate 200 uM, aerobic N.D. +1.1 +0.1 -0.8 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.6 +0.4 -0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +1.1 +0.1 +0.2 -0.9
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.6 -0.0 +0.5 +0.9
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.2 -0.7 +0.3 +0.9
nitrogen source Ammonium chloride (N) N.D. +0.8 +0.7 -0.1 -0.2
stress copper (II) chloride 2 uM, anaerobic N.D. +0.9 -0.7 +0.5 +0.6
stress copper (II) chloride 2 uM, anaerobic N.D. +0.5 -0.1 +0.3 +0.9
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +1.2 +0.3 +0.3 +0.1
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IAI47_07035
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IAI47_07040
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IAI47_07050
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IAI47_07055
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