Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_06820 and IAI47_06825 are separated by 67 nucleotidesIAI47_06825 and IAI47_06830 are separated by 80 nucleotidesIAI47_06830 and IAI47_06835 are separated by 10 nucleotidesIAI47_06835 and IAI47_06840 are separated by 205 nucleotides IAI47_06820: IAI47_06820 - mannitol dehydrogenase family protein, at 1,423,199 to 1,424,659 _06820 IAI47_06825: IAI47_06825 - MFS transporter, at 1,424,727 to 1,426,010 _06825 IAI47_06830: IAI47_06830 - Zn-dependent oxidoreductase, at 1,426,091 to 1,427,101 _06830 IAI47_06835: IAI47_06835 - D-galactonate dehydratase family protein, at 1,427,112 to 1,428,326 _06835 IAI47_06840: IAI47_06840 - lipid kinase YegS, at 1,428,532 to 1,429,431 _06840
Group Condition IAI47_06820 IAI47_06825 IAI47_06830 IAI47_06835 IAI47_06840
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.4 +0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.1 -0.9 -0.0 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.1 -0.4 +0.0 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.0 -0.5 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.5 -0.1 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.3 -0.3 -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.7 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.5 -0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.4 -0.3 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.3 +0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.3 -0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.0 +0.2 -0.3 +0.0 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.4 -0.1 -0.3 +0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.1 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.1 -0.1 -0.2 +0.3 -0.3
no stress control Defined media control, aerobic -0.3 +0.1 +0.3 +0.0 -0.6
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.6 +0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.4 -0.1 -0.1 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.2 +0.3 +0.1 +0.0
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.1 -0.0 +0.3 -0.2 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.6 -0.3 -0.3
carbon source Ying_all64 rep B; time point 3 +0.2 -0.2 +0.1 +0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.4 +0.2 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.4 +0.0 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.1 +0.3 +0.2 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.1 -0.5 +0.0 +1.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.0 +0.2 +0.5
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.3 +0.4 -0.1 +0.4
no stress control Defined media control, anaerobic +0.2 +0.1 +0.4 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.3 +0.2 +0.4
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IAI47_06820
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IAI47_06825
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IAI47_06835
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IAI47_06840
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