Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_06790 and IAI47_06795 are separated by 71 nucleotidesIAI47_06795 and IAI47_06800 are separated by 63 nucleotidesIAI47_06800 and IAI47_06805 are separated by 737 nucleotidesIAI47_06805 and IAI47_06810 overlap by 14 nucleotides IAI47_06790: IAI47_06790 - alkyl hydroperoxide reductase subunit C, at 1,416,828 to 1,417,391 _06790 IAI47_06795: IAI47_06795 - alkyl hydroperoxide reductase subunit F, at 1,417,463 to 1,419,028 _06795 IAI47_06800: IAI47_06800 - AEC family transporter, at 1,419,092 to 1,420,051 _06800 IAI47_06805: IAI47_06805 - hydroxyethylthiazole kinase, at 1,420,789 to 1,421,586 _06805 IAI47_06810: IAI47_06810 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 1,421,573 to 1,422,373 _06810
Group Condition IAI47_06790 IAI47_06795 IAI47_06800 IAI47_06805 IAI47_06810
carbon source Ying_Nucleobase14 rep A; time point 3 -0.5 -0.0 -0.1 -1.6 -3.0
carbon source Ying_Nucleobase14 rep C; time point 3 -0.5 +0.0 +0.1 -1.9 -2.8
carbon source Ying_Nucleobase14 rep B; time point 3 -0.2 +0.2 +0.2 -1.9 -3.0
nitrogen source Ammonium chloride (N) -0.4 +0.1 -0.2 -1.5 -2.0
carbon source Ying_Nucleobase14 rep A; time point 2 -0.5 +0.0 -0.2 -1.1 -1.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.8 +0.1 -0.1 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.7 +0.4 -0.6 +0.0 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +2.5 +0.2 -0.4 -0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.3 +0.0 -0.3 -0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.7 +0.3 -0.5 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +1.7 +0.3 -0.3 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.7 +0.2 -0.2 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.8 +0.4 -0.2 -0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.8 +0.1 -0.2 +0.0 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.2 +0.0 -0.4 -0.0 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.1 +0.1 +0.0 -0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.4 +0.1 -0.3 -0.0 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.4 +0.4 -0.2 -0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.0 +0.6 -0.6 +0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +2.8 +0.3 -0.7 -0.2 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +2.5 +0.5 -0.7 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.3 +0.4 -0.3 -0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.4 +0.3 -0.3 -0.0 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.3 +0.4 -0.4 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.4 +0.2 -0.3 -0.1 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +2.7 +0.2 -0.3 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +2.8 +0.3 -0.1 +0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.8 +0.3 -0.2 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.8 +0.4 -0.4 +0.0 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.5 +0.7 -0.3 +0.2 +0.5
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IAI47_06790
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IAI47_06795
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IAI47_06810
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