Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_06745 and IAI47_06750 are separated by 442 nucleotidesIAI47_06750 and IAI47_06755 are separated by 135 nucleotidesIAI47_06755 and IAI47_06760 are separated by 269 nucleotidesIAI47_06760 and IAI47_06765 are separated by 120 nucleotides IAI47_06745: IAI47_06745 - galactose/methyl galactoside ABC transporter permease MglC, at 1,406,213 to 1,407,223 _06745 IAI47_06750: IAI47_06750 - outer membrane permeability protein SanA, at 1,407,666 to 1,408,385 _06750 IAI47_06755: IAI47_06755 - NAD-dependent malic enzyme, at 1,408,521 to 1,410,218 _06755 IAI47_06760: IAI47_06760 - cytidine deaminase, at 1,410,488 to 1,411,378 _06760 IAI47_06765: IAI47_06765 - CidB/LrgB family autolysis modulator, at 1,411,499 to 1,412,191 _06765
Group Condition IAI47_06745 IAI47_06750 IAI47_06755 IAI47_06760 IAI47_06765
carbon source Ying_Others16 rep B; time point 3 -0.0 -0.8 -2.5 -0.2 +0.0
carbon source Ying_Others16 rep C; time point 3 +0.2 -0.8 -2.7 -0.1 +0.0
carbon source Ying_Others16 rep A; time point 3 +0.1 -0.9 -2.2 -0.2 +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.0 -0.9 -1.8 -0.1 -0.2
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 -1.0 -1.7 +0.0 -0.0
carbon source Ying_Others16 rep B; time point 2 -0.0 -1.0 -1.5 +0.0 -0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -0.0 -0.8 -1.6 -0.1 -0.0
carbon source Ying_Others16 rep C; time point 2 +0.2 -0.8 -1.6 +0.2 -0.2
carbon source Ying_Others16 rep A; time point 2 +0.1 -0.8 -1.4 +0.3 -0.1
stress copper (II) chloride 5 uM, aerobic -0.1 -1.9 -0.1 +0.2 -0.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 -0.7 -1.1 +0.1 -0.1
stress copper (II) chloride 5 uM, aerobic -0.1 -1.5 -0.3 +0.1 -0.1
stress Nickel (II) chloride 40 uM, aerobic +0.0 -1.5 -0.2 -0.0 -0.1
stress Nickel (II) chloride 40 uM, aerobic -0.1 -1.4 -0.2 -0.0 -0.1
carbon source Ying_AminoAcid20 rep C; time point 2 +0.1 -0.7 -1.1 +0.1 -0.0
stress Nickel (II) chloride 40 uM, aerobic -0.0 -1.3 -0.0 -0.0 -0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.3 -0.9 -0.3 -0.1 +0.0
carbon source Ying_AminoAcid20 rep B; time point 2 +0.0 -0.7 -1.0 +0.2 +0.0
stress copper (II) chloride 5 uM, aerobic +0.0 -1.5 -0.1 +0.1 +0.1
carbon source Ying_Others16 rep A; time point 1 +0.2 -0.6 -0.6 +0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.8 +0.1 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.0 -1.2 +0.3 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.1 -0.8 -0.5
carbon source Ying_Nucleobase14 rep B; time point 2 +0.2 -0.4 -0.4 +0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.5 -0.6 +0.1 +0.4
carbon source Ying_Nucleobase14 rep C; time point 2 +0.1 -0.5 -0.2 +0.5 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.4 +0.5 -0.4 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.6 +0.7 -0.3 +0.0
nitrogen source nitrogen source nitrate 5mM -0.1 +1.4 -0.1 +0.0 -0.1
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.2 +0.9 -0.1 +0.2 -0.2
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