Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_06520 and IAI47_06525 are separated by 428 nucleotidesIAI47_06525 and IAI47_06530 overlap by 1 nucleotidesIAI47_06530 and IAI47_06535 are separated by 96 nucleotidesIAI47_06535 and IAI47_06540 are separated by 229 nucleotides IAI47_06520: IAI47_06520 - hypothetical protein, at 1,357,237 to 1,357,431 _06520 IAI47_06525: IAI47_06525 - FAD:protein FMN transferase ApbE, at 1,357,860 to 1,358,909 _06525 IAI47_06530: IAI47_06530 - DNA oxidative demethylase AlkB, at 1,358,909 to 1,359,550 _06530 IAI47_06535: IAI47_06535 - multidrug ABC transporter permease/ATP-binding protein, at 1,359,647 to 1,361,299 _06535 IAI47_06540: IAI47_06540 - carboxylesterase/lipase family protein, at 1,361,529 to 1,363,193 _06540
Group Condition IAI47_06520 IAI47_06525 IAI47_06530 IAI47_06535 IAI47_06540
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 N.D. -0.1 -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 N.D. +0.2 -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.5 N.D. -0.2 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.5 N.D. -0.0 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 N.D. -0.2 -0.6 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 N.D. -0.1 -0.2 +0.1
carbon source Ying_sugar7 rep C; time point 2 -0.3 N.D. -0.6 +0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 N.D. -0.3 +0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.9 N.D. +0.1 +0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 N.D. -0.3 +0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 N.D. +0.0 +0.2 +0.0
stress copper (II) chloride 2 uM, anaerobic -0.8 N.D. +0.0 +0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 N.D. +0.3 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 N.D. -0.3 +0.1 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 N.D. +0.3 -0.2 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 N.D. +0.2 +0.4 -0.0
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 N.D. -0.5 -0.0 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 N.D. +0.4 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 N.D. -0.2 -0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 N.D. -0.2 -0.3 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 N.D. -0.3 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 N.D. +0.2 -0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 N.D. -0.3 -0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.6 N.D. -0.2 +0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 N.D. +0.4 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 N.D. -0.1 -0.2 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 N.D. -0.2 +0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 N.D. +0.1 +0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 N.D. +0.4 +0.0 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. +0.4 +0.2 +0.2
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