Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_06280 and IAI47_06285 are separated by 259 nucleotidesIAI47_06285 and IAI47_06290 are separated by 178 nucleotidesIAI47_06290 and IAI47_06295 overlap by 8 nucleotidesIAI47_06295 and IAI47_06300 are separated by 8 nucleotides IAI47_06280: IAI47_06280 - UbiX family flavin prenyltransferase, at 1,277,411 to 1,277,980 _06280 IAI47_06285: IAI47_06285 - lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT, at 1,278,240 to 1,279,022 _06285 IAI47_06290: IAI47_06290 - histidine ABC transporter permease HisQ, at 1,279,201 to 1,279,890 _06290 IAI47_06295: IAI47_06295 - ABC transporter permease, at 1,279,883 to 1,280,599 _06295 IAI47_06300: IAI47_06300 - histidine ABC transporter ATP-binding protein HisP, at 1,280,608 to 1,281,381 _06300
Group Condition IAI47_06280 IAI47_06285 IAI47_06290 IAI47_06295 IAI47_06300
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.0 -0.3 -0.5 -0.7
carbon source Ying_Others16 rep B; time point 3 N.D. -0.3 -0.3 -0.5 -0.7
carbon source Ying_Others16 rep C; time point 3 N.D. -0.5 -0.2 -0.4 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.8 -0.2 -0.3 -0.5
carbon source Ying_Others16 rep A; time point 3 N.D. -0.4 -0.2 -0.5 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.0 -0.3 -0.3 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 -0.4 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.1 -0.2 -0.3 -0.5
carbon source Ying_Others16 rep C; time point 2 N.D. -0.4 -0.2 -0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.1 -0.1 -0.4 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 N.D. -0.1 -0.1 -0.3 -0.6
carbon source Ying_Others16 rep A; time point 2 N.D. -0.3 +0.1 -0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. +0.1 -0.0 -0.4 -0.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 -0.6 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.1 +0.2 -0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.4 -0.1 -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 N.D. +0.1 +0.2 -0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.0 +0.3 -0.4 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.0 +0.3 -0.2 -0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.4 -0.1 -0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 +0.1 -0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.4 +0.0 -0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.4 -0.2 -0.2 -0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.2 +0.2 -0.1 -0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.1 +0.5 -0.1 -0.5
stress copper (II) chloride 2 uM, anaerobic N.D. -0.3 +0.3 +0.0 +0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.5 -0.0 -0.3 +0.4
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. +0.5 +0.4 +0.2 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. +0.2 +0.6 +0.2 +0.2
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. +0.4 +0.5 +0.4 +0.5
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