Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_06145 and IAI47_06150 are separated by 45 nucleotidesIAI47_06150 and IAI47_06155 are separated by 4 nucleotidesIAI47_06155 and IAI47_06160 are separated by 8 nucleotidesIAI47_06160 and IAI47_06165 are separated by 19 nucleotides IAI47_06145: IAI47_06145 - 50S ribosomal protein L3 N(5)-glutamine methyltransferase, at 1,250,291 to 1,251,223 _06145 IAI47_06150: IAI47_06150 - chorismate synthase, at 1,251,269 to 1,252,354 _06150 IAI47_06155: IAI47_06155 - penicillin-insensitive murein endopeptidase, at 1,252,359 to 1,253,183 _06155 IAI47_06160: IAI47_06160 - TSUP family transporter, at 1,253,192 to 1,253,995 _06160 IAI47_06165: IAI47_06165 - elongation factor P hydroxylase, at 1,254,015 to 1,254,560 _06165
Group Condition IAI47_06145 IAI47_06150 IAI47_06155 IAI47_06160 IAI47_06165
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 N.D. -0.5 -0.5 -1.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 N.D. -0.2 -0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 N.D. -0.1 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 N.D. -0.3 -0.3 -0.2
stress copper (II) chloride 2 uM, anaerobic -0.3 N.D. -0.1 -0.6 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.9 N.D. -0.3 +0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 N.D. -0.4 +0.2 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 N.D. -0.3 -0.2 -0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. -0.0 -0.3 -0.8
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. -0.3 +0.0 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 N.D. +0.1 -0.2 -1.0
stress copper (II) chloride 2 uM, anaerobic -0.4 N.D. -0.5 +0.4 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 N.D. -0.0 +0.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 N.D. -0.0 +0.4 -0.4
stress copper (II) chloride 2 uM, anaerobic +0.2 N.D. -0.3 +0.4 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 N.D. -0.2 -0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.5 N.D. -0.2 -0.3 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 N.D. -0.2 +0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.7 N.D. -0.1 -0.0 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.5 N.D. -0.2 +0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 N.D. -0.3 +0.4 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 N.D. +0.3 +0.4 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.3 N.D. -0.0 +0.6 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 N.D. +0.2 +0.1 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.8 N.D. +0.0 -0.0 -0.4
carbon source Ying_sugar7 rep B; time point 3 +0.3 N.D. -0.1 -0.2 +0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. -0.1 -0.2 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 N.D. +0.1 +0.2 -0.3
carbon source Ying_Nucleobase14 rep A; time point 3 +0.4 N.D. -0.1 -0.1 +0.6
carbon source Ying_Others16 rep B; time point 3 +0.6 N.D. -0.2 +0.0 +0.6
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IAI47_06150
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