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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_06120 and IAI47_06125 are separated by 158 nucleotides
IAI47_06125 and IAI47_06130 overlap by 1 nucleotides
IAI47_06130 and IAI47_06135 are separated by 224 nucleotides
IAI47_06135 and IAI47_06140 are separated by 29 nucleotides
IAI47_06120: IAI47_06120 - YfcZ/YiiS family protein, at 1,244,985 to 1,245,281
_06120
IAI47_06125: IAI47_06125 - acetyl-CoA C-acyltransferase FadI, at 1,245,440 to 1,246,750
_06125
IAI47_06130: IAI47_06130 - fatty acid oxidation complex subunit alpha FadJ, at 1,246,750 to 1,248,846
_06130
IAI47_06135: IAI47_06135 - phosphohistidine phosphatase SixA, at 1,249,071 to 1,249,553
_06135
IAI47_06140: IAI47_06140 - endonuclease SmrB, at 1,249,583 to 1,250,131
_06140
Group
Condition
IAI47
_06120
IAI47
_06125
IAI47
_06130
IAI47
_06135
IAI47
_06140
carbon source
Ying_Others16 rep B; time point 3
-0.2
+0.1
+0.1
-4.2
-0.2
stress
Uranyl Acetate Dihydrate 200 uM, aerobic
-0.2
-0.2
-0.0
-2.9
-0.6
stress
dichromate 5 uM, aerobic
+0.2
-0.1
-0.2
-3.6
-0.1
carbon source
Ying_Others16 rep C; time point 3
-0.2
+0.1
+0.1
-3.6
-0.1
carbon source
Ying_Nucleobase14 rep B; time point 3
-0.2
+0.1
+0.1
-3.4
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.7
+0.3
-0.2
-2.8
-0.0
carbon source
Ying_Nucleobase14 rep A; time point 3
-0.0
-0.0
+0.0
-3.1
-0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.6
-0.0
-0.0
-2.2
-0.3
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.7
-0.0
-0.1
-1.5
+0.2
carbon source
Ying_Others16 rep C; time point 2
-0.3
-0.1
+0.0
-2.6
-0.1
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.9
-0.0
+0.2
-2.1
-0.1
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.5
+0.0
-0.2
-1.1
-0.2
carbon source
Ying_Nucleobase14 rep A; time point 1
-0.2
-0.0
-0.2
-2.6
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.6
+0.1
+0.1
-2.5
+0.1
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.2
-0.0
-2.6
-0.2
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.8
+0.1
+0.0
-1.0
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.7
+0.1
+0.2
-2.2
-0.2
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.1
+0.1
-2.6
-0.1
carbon source
Ying_Nucleobase14 rep C; time point 3
+0.2
+0.2
+0.0
-3.0
-0.1
carbon source
Ying_Others16 rep B; time point 2
-0.1
-0.1
+0.1
-2.6
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-1.1
+0.3
+0.2
-1.8
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
+0.2
-0.1
-2.4
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
+0.2
+0.1
-1.8
-0.3
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
-0.2
+0.2
-2.2
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.3
+0.2
+0.2
-1.7
+0.4
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.0
+0.1
+0.1
-1.6
+0.2
carbon source
Ying_Others16 rep A; time point 3
+0.2
+0.1
+0.3
-2.9
+0.2
carbon source
Ying_Others16 rep A; time point 2
+0.3
-0.1
+0.2
-2.3
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
-0.0
+0.5
-2.3
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.3
+0.4
-2.0
-0.2
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