Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_06120 and IAI47_06125 are separated by 158 nucleotidesIAI47_06125 and IAI47_06130 overlap by 1 nucleotidesIAI47_06130 and IAI47_06135 are separated by 224 nucleotidesIAI47_06135 and IAI47_06140 are separated by 29 nucleotides IAI47_06120: IAI47_06120 - YfcZ/YiiS family protein, at 1,244,985 to 1,245,281 _06120 IAI47_06125: IAI47_06125 - acetyl-CoA C-acyltransferase FadI, at 1,245,440 to 1,246,750 _06125 IAI47_06130: IAI47_06130 - fatty acid oxidation complex subunit alpha FadJ, at 1,246,750 to 1,248,846 _06130 IAI47_06135: IAI47_06135 - phosphohistidine phosphatase SixA, at 1,249,071 to 1,249,553 _06135 IAI47_06140: IAI47_06140 - endonuclease SmrB, at 1,249,583 to 1,250,131 _06140
Group Condition IAI47_06120 IAI47_06125 IAI47_06130 IAI47_06135 IAI47_06140
carbon source Ying_Others16 rep B; time point 3 -0.2 +0.1 +0.1 -4.2 -0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.2 -0.2 -0.0 -2.9 -0.6
stress dichromate 5 uM, aerobic +0.2 -0.1 -0.2 -3.6 -0.1
carbon source Ying_Others16 rep C; time point 3 -0.2 +0.1 +0.1 -3.6 -0.1
carbon source Ying_Nucleobase14 rep B; time point 3 -0.2 +0.1 +0.1 -3.4 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.7 +0.3 -0.2 -2.8 -0.0
carbon source Ying_Nucleobase14 rep A; time point 3 -0.0 -0.0 +0.0 -3.1 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.6 -0.0 -0.0 -2.2 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.7 -0.0 -0.1 -1.5 +0.2
carbon source Ying_Others16 rep C; time point 2 -0.3 -0.1 +0.0 -2.6 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.0 +0.2 -2.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 +0.0 -0.2 -1.1 -0.2
carbon source Ying_Nucleobase14 rep A; time point 1 -0.2 -0.0 -0.2 -2.6 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.6 +0.1 +0.1 -2.5 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.0 -2.6 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.8 +0.1 +0.0 -1.0 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.7 +0.1 +0.2 -2.2 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.1 -2.6 -0.1
carbon source Ying_Nucleobase14 rep C; time point 3 +0.2 +0.2 +0.0 -3.0 -0.1
carbon source Ying_Others16 rep B; time point 2 -0.1 -0.1 +0.1 -2.6 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -1.1 +0.3 +0.2 -1.8 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.2 -0.1 -2.4 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 +0.2 +0.1 -1.8 -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.2 +0.2 -2.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.3 +0.2 +0.2 -1.7 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 +0.1 +0.1 -1.6 +0.2
carbon source Ying_Others16 rep A; time point 3 +0.2 +0.1 +0.3 -2.9 +0.2
carbon source Ying_Others16 rep A; time point 2 +0.3 -0.1 +0.2 -2.3 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.0 +0.5 -2.3 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 +0.4 -2.0 -0.2
remove
IAI47_06120
plot
remove
IAI47_06125
plot
remove
IAI47_06130
remove
IAI47_06135
plot
remove
IAI47_06140
plot