Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_06100 and IAI47_06105 overlap by 1 nucleotidesIAI47_06105 and IAI47_06110 are separated by 150 nucleotidesIAI47_06110 and IAI47_06115 are separated by 317 nucleotidesIAI47_06115 and IAI47_06120 are separated by 358 nucleotides IAI47_06100: IAI47_06100 - cytochrome c-type biogenesis protein CcmH, at 1,240,447 to 1,240,899 _06100 IAI47_06105: IAI47_06105 - c-type cytochrome biogenesis protein CcmI, at 1,240,899 to 1,242,110 _06105 IAI47_06110: IAI47_06110 - phospholipid-binding lipoprotein MlaA, at 1,242,261 to 1,243,025 _06110 IAI47_06115: IAI47_06115 - long-chain fatty acid transporter FadL, at 1,243,343 to 1,244,626 _06115 IAI47_06120: IAI47_06120 - YfcZ/YiiS family protein, at 1,244,985 to 1,245,281 _06120
Group Condition IAI47_06100 IAI47_06105 IAI47_06110 IAI47_06115 IAI47_06120
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 +0.1 +0.0 -4.3 +0.0
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.1 +0.2 -0.0 -3.3 -0.7
carbon source Ying_Others16 rep B; time point 3 -0.1 +0.1 +0.0 -3.3 -0.2
carbon source Ying_Others16 rep C; time point 3 +0.1 +0.2 +0.0 -3.4 -0.2
stress dichromate 5 uM, aerobic -0.3 -0.1 -0.3 -1.9 -0.6
carbon source Ying_Others16 rep B; time point 2 -0.2 +0.0 +0.0 -2.8 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.1 -0.3 -0.2 -1.7
carbon source Ying_Others16 rep C; time point 2 -0.1 -0.0 +0.1 -2.4 -0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.2 +0.2 -0.0 -3.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.3 -0.3 -1.5
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.0 -0.1 +0.1 -1.8 -0.6
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.2 -0.1 +0.2 -1.4 -0.7
carbon source Ying_Others16 rep A; time point 2 +0.1 -0.1 +0.0 -2.6 +0.3
carbon source Ying_Others16 rep A; time point 3 +0.2 +0.1 -0.1 -2.6 +0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.1 -0.2 +0.1 -1.1 -0.9
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.0 -0.3 -0.2 -1.8
stress dichromate 5 uM, aerobic -0.3 -0.1 -0.3 -1.5 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 -0.4 +0.8 -1.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -1.2 +0.9 -0.7
stress copper (II) chloride 2 uM, anaerobic -0.0 +0.1 -0.5 +1.2 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.5 +0.5 +0.2 -1.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.5 -0.0 +0.5 -1.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.3 +0.6 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.4 +0.1 +0.6 -0.9
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.3 +0.2 +0.6 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.9 +0.6 -0.4 +0.4 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 +0.6 -0.1 +0.5 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.2 +0.8 -0.0 +0.4 -0.3
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.4 +0.1 +0.6 +1.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.9 +0.7 +0.1 +0.7 +0.8
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IAI47_06100
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IAI47_06105
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IAI47_06120
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