Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_06095 and IAI47_06100 overlap by 4 nucleotidesIAI47_06100 and IAI47_06105 overlap by 1 nucleotidesIAI47_06105 and IAI47_06110 are separated by 150 nucleotidesIAI47_06110 and IAI47_06115 are separated by 317 nucleotides IAI47_06095: IAI47_06095 - DsbE family thiol:disulfide interchange protein, at 1,239,893 to 1,240,450 _06095 IAI47_06100: IAI47_06100 - cytochrome c-type biogenesis protein CcmH, at 1,240,447 to 1,240,899 _06100 IAI47_06105: IAI47_06105 - c-type cytochrome biogenesis protein CcmI, at 1,240,899 to 1,242,110 _06105 IAI47_06110: IAI47_06110 - phospholipid-binding lipoprotein MlaA, at 1,242,261 to 1,243,025 _06110 IAI47_06115: IAI47_06115 - long-chain fatty acid transporter FadL, at 1,243,343 to 1,244,626 _06115
Group Condition IAI47_06095 IAI47_06100 IAI47_06105 IAI47_06110 IAI47_06115
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.0 +0.1 +0.1 +0.0 -4.3
carbon source Ying_Others16 rep B; time point 3 -0.0 -0.1 +0.1 +0.0 -3.3
carbon source Ying_Others16 rep C; time point 3 -0.0 +0.1 +0.2 +0.0 -3.4
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.0 +0.1 +0.2 -0.0 -3.3
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.2 +0.2 +0.2 -0.0 -3.2
carbon source Ying_Others16 rep B; time point 2 +0.1 -0.2 +0.0 +0.0 -2.8
stress dichromate 5 uM, aerobic -0.2 -0.3 -0.1 -0.3 -1.9
carbon source Ying_Others16 rep A; time point 2 -0.1 +0.1 -0.1 +0.0 -2.6
carbon source Ying_Others16 rep A; time point 3 -0.1 +0.2 +0.1 -0.1 -2.6
carbon source Ying_Others16 rep C; time point 2 -0.1 -0.1 -0.0 +0.1 -2.4
stress dichromate 5 uM, aerobic -0.3 -0.3 -0.1 -0.3 -1.5
nitrogen source nitrogen source nitrate 5mM -0.2 -0.0 -0.2 +0.0 -1.6
carbon source Ying_sugar7 rep C; time point 2 -0.3 +0.2 -0.2 -0.2 -1.2
nitrogen source TNT (N) -0.1 +0.1 -0.0 -0.7 -1.0
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.2 -0.0 -0.1 +0.1 -1.8
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.0 -0.1 -0.2 +0.2 -1.4
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.2 -0.2 -0.1 +0.2 -1.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.1 +0.1 -0.5 +0.6
stress copper (II) chloride 2 uM, anaerobic -0.6 +0.0 +0.1 -0.4 +1.0
stress copper (II) chloride 2 uM, anaerobic -0.6 -0.0 +0.1 -0.5 +1.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.2 -1.2 +0.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.5 +0.2 -0.1 +0.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.2 +0.1 +0.3 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.6 +0.5 -0.0 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.7 +0.3 +0.2 +0.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.8 +0.6 -0.1 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.2 +0.9 +0.6 -0.4 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.0 +0.7 +0.4 +0.1 +0.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 +0.9 +0.7 +0.1 +0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.0 +1.2 +0.8 -0.0 +0.4
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