Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_05855 and IAI47_05860 overlap by 4 nucleotidesIAI47_05860 and IAI47_05865 overlap by 11 nucleotidesIAI47_05865 and IAI47_05870 are separated by 454 nucleotidesIAI47_05870 and IAI47_05875 are separated by 9 nucleotides IAI47_05855: IAI47_05855 - recombination protein NinG, at 1,206,380 to 1,206,958 _05855 IAI47_05860: IAI47_05860 - YlcG family protein, at 1,206,955 to 1,207,080 _05860 IAI47_05865: IAI47_05865 - hypothetical protein, at 1,207,070 to 1,207,693 _05865 IAI47_05870: IAI47_05870 - lysis protein, at 1,208,148 to 1,208,390 _05870 IAI47_05875: IAI47_05875 - lysozyme, at 1,208,400 to 1,208,903 _05875
Group Condition IAI47_05855 IAI47_05860 IAI47_05865 IAI47_05870 IAI47_05875
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.9 +0.2 +0.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.4 +0.2 +1.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.7 +0.0 +0.9 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.6 +0.4 +0.3 +0.8
stress dichromate 2 uM, anaerobic +0.3 +0.5 +0.3 +0.7 +0.7
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.2 +1.2 +0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.7 +1.0 +0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.4 +1.5 +0.3 +0.6
nitrogen source nitrogen source nitrite 0.5mM +0.6 +0.1 +1.5 +0.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.5 +1.5 +0.7
stress dichromate 2 uM, anaerobic +0.2 +0.5 +0.7 +0.9 +0.6
nitrogen source nitrogen source nitrite 1mM +0.5 +0.7 +1.5 -0.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.4 +0.7 +1.1 +0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.0 +0.2 +1.4 +1.1
carbon source Ying_sugar7 rep C; time point 2 +0.7 +1.0 +0.2 +0.6 +0.7
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.5 +0.6 +0.7 +1.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.0 +0.7 +1.2 +0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.8 +1.5 +0.4 +0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.6 +1.6 +0.4 +0.7
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.3 +0.5 +0.8 +1.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +1.1 +0.6 +0.4 +1.0
nitrogen source nitrogen source nitrite 0.5mM +0.6 +0.6 +1.8 +0.3 +0.5
nitrogen source nitrogen source nitrite 1mM +1.0 +0.8 +1.5 +0.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 +0.4 +0.4 +1.2 +1.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +1.1 +1.8 +0.3 +1.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.9 +0.4 +0.9 +0.8 +1.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.9 +1.8 +0.8 +0.7
stress dichromate 5 uM, aerobic +0.8 +1.4 +1.6 +1.7 +1.7
stress dichromate 5 uM, aerobic +1.2 +1.4 +1.6 +2.2 +2.0
stress dichromate 5 uM, aerobic +1.1 +1.5 +1.6 +2.4 +1.8
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IAI47_05855
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IAI47_05860
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IAI47_05870
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IAI47_05875
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