Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_05580 and IAI47_05585 are separated by 203 nucleotidesIAI47_05585 and IAI47_05590 are separated by 2 nucleotidesIAI47_05590 and IAI47_05595 are separated by 149 nucleotidesIAI47_05595 and IAI47_05600 are separated by 13 nucleotides IAI47_05580: IAI47_05580 - membrane protein YpdK, at 1,175,280 to 1,175,354 _05580 IAI47_05585: IAI47_05585 - HlyD family secretion protein, at 1,175,558 to 1,176,586 _05585 IAI47_05590: IAI47_05590 - MFS transporter, at 1,176,589 to 1,178,187 _05590 IAI47_05595: IAI47_05595 - IclR family transcriptional regulator, at 1,178,337 to 1,179,116 _05595 IAI47_05600: IAI47_05600 - universal stress protein, at 1,179,130 to 1,179,582 _05600
Group Condition IAI47_05580 IAI47_05585 IAI47_05590 IAI47_05595 IAI47_05600
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.7 -0.2 +0.0 -1.0 -0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -4.0 +0.0 +0.3 -0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.9 -0.0 +0.3 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.7 -0.1 -0.0 -0.5 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.1 -0.1 +0.2 -0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.3 -0.1 +0.2 -1.0 +0.1
no stress control Defined media control, aerobic -2.7 -0.1 -0.0 -0.1 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.2 -0.3 -0.9 -0.4
no stress control Defined media control, aerobic -2.8 -0.2 +0.3 -0.3 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.8 -0.1 -0.4 -0.3 -0.0
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -2.0 +0.2 -0.1 -0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.2 -0.2 -0.8 -0.1
stress Nickel (II) chloride 20 uM, anaerobic -2.4 -0.1 +0.1 -0.1 +0.0
stress copper (II) chloride 2 uM, anaerobic -2.2 +0.1 +0.1 +0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.9 +0.0 +0.3 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.8 +0.3 -0.1 +0.1 -0.1
carbon source Ying_sugar7 rep C; time point 2 -1.8 -0.1 +0.3 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.9 -0.1 +0.0 +0.4 +0.0
stress copper (II) chloride 2 uM, anaerobic -2.1 +0.5 -0.1 +0.5 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.2 -0.1 -0.0 +0.3 +0.7
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.2 -0.1 +0.6 -0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.7 +0.3 -0.3 +0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.5 +0.1 +0.1 +0.8 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +1.5 +0.0 +0.2 +0.5 -0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.7 +0.1 +0.2 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +1.1 +0.2 -0.2 +0.7 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +1.7 -0.1 +0.4 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.0 -0.0 +0.3 +1.1 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.5 -0.1 +0.1 -0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +2.7 +0.2 -0.0 +0.5 -0.4
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