Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_05325 and IAI47_05330 are separated by 280 nucleotidesIAI47_05330 and IAI47_05335 are separated by 144 nucleotidesIAI47_05335 and IAI47_05340 are separated by 189 nucleotidesIAI47_05340 and IAI47_05345 overlap by 4 nucleotides IAI47_05325: IAI47_05325 - DUF1471 domain-containing protein, at 1,127,545 to 1,127,817 _05325 IAI47_05330: IAI47_05330 - L-asparagine permease, at 1,128,098 to 1,129,594 _05330 IAI47_05335: IAI47_05335 - GDP-mannose pyrophosphatase NudK, at 1,129,739 to 1,130,317 _05335 IAI47_05340: IAI47_05340 - DUF1176 domain-containing protein, at 1,130,507 to 1,131,580 _05340 IAI47_05345: IAI47_05345 - D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH, at 1,131,577 to 1,132,740 _05345
Group Condition IAI47_05325 IAI47_05330 IAI47_05335 IAI47_05340 IAI47_05345
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.9 +0.2 -0.5 -0.4 -0.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -2.2 -0.0 -0.1 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.9 -0.2 -0.0 -0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.0 +0.1 -0.1 -0.2 +0.2
carbon source Ying_AminoAcid20 rep B; time point 2 -0.4 -1.4 -0.0 +0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.7 -0.0 +0.2 -0.3 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 +0.0 +0.0 -0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -1.3 -0.0 -0.3 -0.0 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.1 +0.1 +0.3 -0.1 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 +0.0 +0.1 -0.3 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.0 -0.2 -0.2 -0.3 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.7 +0.2 +0.1 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -1.2 +0.1 -0.1 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 +0.1 -0.3 -0.3 -0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.3 -0.0 -0.2 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.8 +0.2 +0.1 -0.1 +0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 +0.2 +0.1 -0.3 -0.1
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 -1.7 +0.0 +0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.8 +0.1 +0.3 -0.0 +0.1
stress Uranyl Acetate Dihydrate 200 uM, anaerobic -1.3 +0.2 +0.1 -0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.1 +0.2 -0.3 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 +0.5 -1.4 -0.1 +0.1 -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 +0.6 -1.7 -0.0 +0.3 +0.0
stress copper (II) chloride 2 uM, anaerobic -1.0 +0.3 +0.2 -0.5 +0.1
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -1.0 +0.2 +0.2 -0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 +0.6 -0.2 -0.1 -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 +0.6 -1.5 -0.0 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 +0.4 -0.1 -0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.4 +0.2 -0.3 +0.0 +0.2
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.1 +0.4 -0.1 +0.4 -0.0
remove
IAI47_05325
plot
remove
IAI47_05330
plot
remove
IAI47_05335
remove
IAI47_05340
plot
remove
IAI47_05345
plot