Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_05170 and IAI47_05175 are separated by 103 nucleotidesIAI47_05175 and IAI47_05180 overlap by 4 nucleotidesIAI47_05180 and IAI47_05185 are separated by 229 nucleotidesIAI47_05185 and IAI47_05190 are separated by 137 nucleotides IAI47_05170: IAI47_05170 - phosphate ABC transporter ATP-binding protein, at 1,094,399 to 1,095,172 _05170 IAI47_05175: IAI47_05175 - phosphoribosylglycinamide formyltransferase, at 1,095,276 to 1,095,914 _05175 IAI47_05180: IAI47_05180 - phosphoribosylformylglycinamidine cyclo-ligase, at 1,095,911 to 1,096,951 _05180 IAI47_05185: IAI47_05185 - uracil phosphoribosyltransferase, at 1,097,181 to 1,097,807 _05185 IAI47_05190: IAI47_05190 - uracil permease, at 1,097,945 to 1,099,228 _05190
Group Condition IAI47_05170 IAI47_05175 IAI47_05180 IAI47_05185 IAI47_05190
carbon source Ying_Others16 rep A; time point 3 +0.1 -3.5 -4.4 -0.2 -0.1
carbon source Ying_Others16 rep C; time point 3 +0.1 -3.7 -4.4 +0.0 -0.0
carbon source Ying_Others16 rep B; time point 3 +0.2 -3.5 -4.5 +0.1 -0.1
carbon source Ying_sugar7 rep B; time point 2 -0.0 -3.1 -4.9 +0.3 +0.1
carbon source Ying_Others16 rep C; time point 2 +0.2 -2.7 -4.4 -0.4 -0.2
carbon source Ying_sugar7 rep A; time point 2 -0.1 -2.6 -5.1 +0.4 -0.1
carbon source Ying_Others16 rep A; time point 2 +0.2 -3.0 -4.2 -0.0 -0.2
carbon source Ying_sugar7 rep B; time point 3 -0.2 -2.5 -4.5 +0.0 +0.1
carbon source Ying_Others16 rep B; time point 2 +0.1 -2.4 -4.3 -0.1 -0.1
carbon source Ying_sugar7 rep C; time point 2 -0.3 -2.4 -4.5 +0.4 +0.0
stress Cadmium acetate 8 uM, aerobic +0.1 -1.4 -5.3 -0.0 +0.0
carbon source Ying_sugar7 rep C; time point 1 -0.1 -2.4 -4.3 +0.3 -0.0
carbon source Ying_sugar7 rep A; time point 3 +0.0 -1.9 -4.5 +0.1 -0.1
carbon source Ying_AminoAcid20 rep B; time point 2 -0.1 -1.2 -4.9 -0.1 -0.1
carbon source Ying_AminoAcid20 rep C; time point 2 +0.0 -1.3 -4.9 +0.2 -0.2
carbon source Ying_sugar7 rep B; time point 1 +0.1 -2.3 -4.1 +0.1 +0.0
carbon source Ying_sugar7 rep C; time point 3 +0.1 -1.7 -4.6 +0.2 -0.3
nitrogen source Ammonium chloride (N) -0.1 -0.6 -4.2 -0.6 -0.5
carbon source Ying_AminoAcid20 rep B; time point 3 -0.0 -1.4 -4.5 +0.1 -0.2
stress copper (II) chloride 5 uM, aerobic +0.1 -1.2 -4.9 -0.2 +0.2
stress Cadmium acetate 8 uM, aerobic +0.0 -1.2 -4.9 +0.1 +0.0
no stress control Defined media control, aerobic +0.1 -1.2 -4.8 -0.0 +0.0
stress Nickel (II) chloride 40 uM, aerobic +0.1 -1.3 -4.5 -0.4 +0.1
carbon source Ying_sugar7 rep A; time point 1 +0.1 -2.2 -4.0 +0.2 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.2 -1.0 -4.6 +0.1 -0.1
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 -1.4 -4.5 +0.2 -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.4 -1.5 -4.0 +0.1 +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 -1.3 -4.5 +0.2 -0.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 -1.2 -4.7 +0.3 -0.1
no stress control Defined media control, aerobic +0.2 -1.3 -4.7 +0.3 -0.1
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IAI47_05170
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IAI47_05175
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IAI47_05190
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