Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_05095 and IAI47_05100 are separated by 116 nucleotidesIAI47_05100 and IAI47_05105 are separated by 168 nucleotidesIAI47_05105 and IAI47_05110 are separated by 68 nucleotidesIAI47_05110 and IAI47_05115 are separated by 302 nucleotides IAI47_05095: IAI47_05095 - peptidase M4 family protein, at 1,076,390 to 1,077,403 _05095 IAI47_05100: IAI47_05100 - exodeoxyribonuclease VII large subunit, at 1,077,520 to 1,078,893 _05100 IAI47_05105: IAI47_05105 - IMP dehydrogenase, at 1,079,062 to 1,080,528 _05105 IAI47_05110: IAI47_05110 - glutamine-hydrolyzing GMP synthase, at 1,080,597 to 1,082,177 _05110 IAI47_05115: IAI47_05115 - DUF3750 domain-containing protein, at 1,082,480 to 1,083,253 _05115
Group Condition IAI47_05095 IAI47_05100 IAI47_05105 IAI47_05110 IAI47_05115
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 N.D. N.D. -0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.4 N.D. N.D. -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.0 -0.4 N.D. N.D. -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 N.D. N.D. -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.5 N.D. N.D. -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.4 N.D. N.D. -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.1 N.D. N.D. -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 N.D. N.D. -0.5
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 -0.4 N.D. N.D. -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.5 N.D. N.D. -0.2
stress copper (II) chloride 2 uM, anaerobic -0.4 +0.4 N.D. N.D. -0.4
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.4 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 N.D. N.D. -0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 N.D. N.D. -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.3 N.D. N.D. -0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.3 N.D. N.D. -0.2
stress copper (II) chloride 2 uM, anaerobic +0.4 -0.4 N.D. N.D. -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 N.D. N.D. -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.3 N.D. N.D. -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.2 +0.3 N.D. N.D. -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.1 N.D. N.D. +0.3
nitrogen source Ammonium chloride (N) +0.4 -0.2 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.1 +0.4 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 N.D. N.D. +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 N.D. N.D. -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.2 N.D. N.D. +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.3 N.D. N.D. +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 N.D. N.D. +0.2
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IAI47_05095
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IAI47_05100
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IAI47_05110
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IAI47_05115
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