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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_05085 and IAI47_05090 are separated by 40 nucleotides
IAI47_05090 and IAI47_05095 overlap by 4 nucleotides
IAI47_05095 and IAI47_05100 are separated by 116 nucleotides
IAI47_05100 and IAI47_05105 are separated by 168 nucleotides
IAI47_05085: IAI47_05085 - glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase, at 1,073,579 to 1,076,020
_05085
IAI47_05090: IAI47_05090 - hypothetical protein, at 1,076,061 to 1,076,393
_05090
IAI47_05095: IAI47_05095 - peptidase M4 family protein, at 1,076,390 to 1,077,403
_05095
IAI47_05100: IAI47_05100 - exodeoxyribonuclease VII large subunit, at 1,077,520 to 1,078,893
_05100
IAI47_05105: IAI47_05105 - IMP dehydrogenase, at 1,079,062 to 1,080,528
_05105
Group
Condition
IAI47
_05085
IAI47
_05090
IAI47
_05095
IAI47
_05100
IAI47
_05105
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-4.8
-0.2
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-5.0
+0.1
-0.1
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-4.6
-0.1
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-4.3
-0.3
-0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-4.4
-0.1
-0.1
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-4.5
+0.0
-0.1
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-4.2
-0.1
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-4.2
-0.1
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
-3.7
-0.0
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-4.1
+0.0
+0.1
N.D.
carbon source
Ying_all64 rep B; time point 3
+0.0
-4.0
-0.0
-0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-3.9
-0.2
-0.0
N.D.
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
-3.8
-0.1
+0.1
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-3.8
+0.0
-0.1
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-3.8
-0.1
-0.0
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-3.8
+0.1
-0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-4.3
+0.3
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
-3.6
+0.1
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-3.6
-0.0
-0.1
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-3.5
+0.0
-0.2
N.D.
carbon source
Ying_all64 rep A; time point 3
-0.1
-3.3
+0.1
-0.2
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-3.4
-0.1
-0.1
N.D.
carbon source
Ying_sugar7 rep A; time point 3
+0.0
-3.5
+0.2
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-3.3
-0.2
-0.0
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.0
-2.9
+0.1
-0.4
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.1
-3.1
+0.0
-0.0
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-3.0
-0.1
-0.1
N.D.
carbon source
Ying_sugar7 rep C; time point 3
+0.1
-3.1
+0.1
-0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-2.9
-0.0
-0.1
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-2.6
+0.1
-0.4
N.D.
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IAI47_05095
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