Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_05050 and IAI47_05055 are separated by 37 nucleotidesIAI47_05055 and IAI47_05060 are separated by 105 nucleotidesIAI47_05060 and IAI47_05065 are separated by 39 nucleotidesIAI47_05065 and IAI47_05070 are separated by 19 nucleotides IAI47_05050: IAI47_05050 - cytoskeleton protein RodZ, at 1,065,903 to 1,066,922 _05050 IAI47_05055: IAI47_05055 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 1,066,960 to 1,068,081 _05055 IAI47_05060: IAI47_05060 - histidine--tRNA ligase, at 1,068,187 to 1,069,461 _05060 IAI47_05065: IAI47_05065 - YfgM family protein, at 1,069,501 to 1,070,118 _05065 IAI47_05070: IAI47_05070 - outer membrane protein assembly factor BamB, at 1,070,138 to 1,071,319 _05070
Group Condition IAI47_05050 IAI47_05055 IAI47_05060 IAI47_05065 IAI47_05070
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.5 N.D. N.D. -0.4 -3.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.9 N.D. N.D. -0.4 -3.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.5 N.D. N.D. +0.1 -3.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 N.D. N.D. -0.3 -4.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 N.D. N.D. -0.7 -3.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 N.D. N.D. -0.4 -4.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 N.D. N.D. -0.6 -3.8
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 N.D. N.D. -0.9 -4.2
no stress control Defined media control, aerobic -0.1 N.D. N.D. -0.6 -4.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.3 N.D. N.D. -0.6 -3.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.8 N.D. N.D. +0.2 -3.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 N.D. N.D. -0.6 -3.7
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.4 N.D. N.D. -0.1 -4.9
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 N.D. N.D. -0.1 -3.8
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 N.D. N.D. -0.7 -3.8
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 N.D. N.D. +0.0 -3.8
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 N.D. N.D. +0.1 -4.3
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.4 N.D. N.D. +0.1 -4.8
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 N.D. N.D. +0.3 -4.3
no stress control Defined media control, aerobic +0.2 N.D. N.D. -0.4 -4.8
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 N.D. N.D. +0.3 -4.2
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.2 N.D. N.D. -0.1 -4.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 N.D. N.D. +0.3 -3.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 N.D. N.D. +0.7 -3.8
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.3 N.D. N.D. +0.6 -3.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 N.D. N.D. +0.5 -4.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 N.D. N.D. +0.7 -3.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -1.1 N.D. N.D. +0.8 -3.7
nitrogen source nitrogen source nitrate 5mM +0.8 N.D. N.D. +0.3 -4.2
nitrogen source nitrogen source nitrate 20mM +0.9 N.D. N.D. +0.5 -4.2
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