Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_04940 and IAI47_04945 overlap by 4 nucleotidesIAI47_04945 and IAI47_04950 are separated by 184 nucleotidesIAI47_04950 and IAI47_04955 are separated by 405 nucleotidesIAI47_04955 and IAI47_04960 are separated by 326 nucleotides IAI47_04940: IAI47_04940 - two-component system QseEF-associated lipoprotein QseG, at 1,037,779 to 1,038,447 _04940 IAI47_04945: IAI47_04945 - two-component system response regulator GlrR, at 1,038,444 to 1,039,781 _04945 IAI47_04950: IAI47_04950 - nitrogen regulatory protein P-II, at 1,039,966 to 1,040,304 _04950 IAI47_04955: IAI47_04955 - NO-inducible flavohemoprotein, at 1,040,710 to 1,041,894 _04955 IAI47_04960: IAI47_04960 - serine hydroxymethyltransferase, at 1,042,221 to 1,043,474 _04960
Group Condition IAI47_04940 IAI47_04945 IAI47_04950 IAI47_04955 IAI47_04960
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 -0.8 -1.2 +0.2 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.8 -1.0 -0.0 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.8 -0.9 +0.1 N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 -2.2 +0.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.9 -0.7 +0.2 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 -0.1 -1.8 -0.2 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 -0.0 +0.0 -1.8 -0.1 N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.2 -1.7 +0.1 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 -0.1 -1.8 -0.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.6 -0.9 +0.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.3 -1.0 -0.0 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.0 -1.4 -0.4 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.2 -1.4 +0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.3 -1.3 +0.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.3 -0.8 +0.2 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.2 -1.5 -0.2 N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 -1.6 -0.0 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.7 -0.9 +0.2 N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.3 -1.3 +0.2 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.3 -0.7 -0.4 N.D.
carbon source Ying_all64 rep C; time point 3 +0.3 +0.2 -1.2 -0.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.0 -0.9 -0.3 N.D.
carbon source Ying_all64 rep B; time point 3 +0.4 +0.2 -1.0 -0.1 N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.1 -1.3 +0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 -0.8 +1.3 +0.0 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.3 -0.7 -0.4 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.0 -0.8 +0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.5 +0.7 -0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.5 +0.5 +0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 +0.5 +0.6 +0.0 N.D.
remove
IAI47_04940
plot		 remove
IAI47_04945
plot		 remove
IAI47_04950		 remove
IAI47_04955
plot		 remove
IAI47_04960
plot