Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_04925 and IAI47_04930 are separated by 266 nucleotidesIAI47_04930 and IAI47_04935 are separated by 579 nucleotidesIAI47_04935 and IAI47_04940 are separated by 3 nucleotidesIAI47_04940 and IAI47_04945 overlap by 4 nucleotides IAI47_04925: IAI47_04925 - membrane-bound lytic murein transglycosylase MltF, at 1,030,157 to 1,031,614 _04925 IAI47_04930: IAI47_04930 - phosphoribosylformylglycinamidine synthase, at 1,031,881 to 1,035,768 _04930 IAI47_04935: IAI47_04935 - HAMP domain-containing histidine kinase, at 1,036,348 to 1,037,775 _04935 IAI47_04940: IAI47_04940 - two-component system QseEF-associated lipoprotein QseG, at 1,037,779 to 1,038,447 _04940 IAI47_04945: IAI47_04945 - two-component system response regulator GlrR, at 1,038,444 to 1,039,781 _04945
Group Condition IAI47_04925 IAI47_04930 IAI47_04935 IAI47_04940 IAI47_04945
nitrogen source Ammonium chloride (N) -0.3 -4.4 -0.0 -0.5 -0.3
stress copper (II) chloride 5 uM, aerobic +0.2 -4.6 -0.4 -0.4 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.1 -4.5 -0.2 -0.3 -0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.0 -4.5 -0.3 -0.1 -0.3
stress Cadmium acetate 8 uM, aerobic +0.1 -4.6 -0.2 -0.2 -0.3
nitrogen source nitrogen source Ammonium chloride 20mM -0.4 -4.5 +0.2 -0.1 -0.2
stress Nickel (II) chloride 40 uM, aerobic +0.2 -4.7 -0.1 -0.1 -0.2
stress Cobalt chloride 10 uM, aerobic +0.2 -4.4 -0.2 -0.3 -0.2
stress Cobalt chloride 10 uM, aerobic +0.2 -4.5 -0.2 -0.2 -0.2
stress Cadmium acetate 8 uM, aerobic +0.4 -4.6 -0.1 -0.1 -0.4
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 -4.7 -0.1 -0.0 -0.1
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 -4.7 -0.2 +0.1 -0.1
stress copper (II) chloride 5 uM, aerobic +0.4 -4.4 -0.3 -0.1 -0.2
carbon source Ying_Others16 rep B; time point 3 +0.5 -4.7 -0.0 -0.2 -0.2
stress Nickel (II) chloride 40 uM, aerobic +0.3 -4.4 -0.0 -0.3 -0.3
stress copper (II) chloride 5 uM, aerobic +0.3 -4.3 -0.1 -0.2 -0.3
no stress control Defined media control, aerobic +0.3 -4.0 -0.2 -0.3 -0.3
carbon source Ying_Others16 rep C; time point 3 +0.5 -4.6 -0.1 -0.0 -0.1
carbon source Ying_sugar7 rep B; time point 2 +0.2 -4.8 -0.1 +0.2 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.2 -4.7 +0.1 -0.1 +0.1
carbon source Ying_Others16 rep C; time point 2 +0.4 -4.5 +0.0 -0.1 -0.1
carbon source Ying_Others16 rep A; time point 3 +0.4 -4.6 -0.1 +0.1 -0.1
stress dichromate 5 uM, aerobic +0.2 -4.1 +0.3 -0.4 -0.2
carbon source Ying_sugar7 rep C; time point 3 +0.0 -4.7 +0.3 +0.3 +0.0
carbon source Ying_Others16 rep A; time point 2 +0.4 -4.4 -0.3 +0.1 +0.1
carbon source Ying_sugar7 rep A; time point 2 +0.1 -4.7 -0.0 +0.3 +0.2
carbon source Ying_Others16 rep B; time point 2 +0.5 -4.4 +0.0 -0.1 +0.1
carbon source Ying_sugar7 rep A; time point 3 +0.0 -4.7 +0.3 +0.4 +0.2
carbon source Ying_sugar7 rep B; time point 3 +0.1 -4.6 +0.2 +0.3 +0.4
nitrogen source nitrogen source nitrate 20mM -0.5 -3.7 +0.6 +0.1 +0.1
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