Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_04835 and IAI47_04840 are separated by 164 nucleotidesIAI47_04840 and IAI47_04845 overlap by 16 nucleotidesIAI47_04845 and IAI47_04850 are separated by 412 nucleotidesIAI47_04850 and IAI47_04855 are separated by 30 nucleotides IAI47_04835: IAI47_04835 - ATP-dependent RNA helicase SrmB, at 1,013,954 to 1,015,282 _04835 IAI47_04840: IAI47_04840 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 1,015,447 to 1,016,196 _04840 IAI47_04845: IAI47_04845 - L-aspartate oxidase, at 1,016,181 to 1,017,800 _04845 IAI47_04850: IAI47_04850 - RNA polymerase sigma factor RpoE, at 1,018,213 to 1,018,788 _04850 IAI47_04855: IAI47_04855 - anti-sigma-E factor RseA, at 1,018,819 to 1,019,472 _04855
Group Condition IAI47_04835 IAI47_04840 IAI47_04845 IAI47_04850 IAI47_04855
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.3 -0.3 +0.1 N.D. -1.9
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.2 -0.7 +0.1 N.D. -0.7
carbon source Ying_AminoAcid20 rep A; time point 3 -2.1 -0.1 -0.5 N.D. -0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.7 -0.3 -0.0 N.D. -1.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.3 +0.3 +0.1 N.D. -1.0
stress copper (II) chloride 5 uM, aerobic -1.5 -0.0 -1.4 N.D. +0.2
stress copper (II) chloride 5 uM, aerobic -1.6 -0.1 -1.3 N.D. +0.3
carbon source Ying_all64 rep C; time point 3 -2.9 -0.1 -0.0 N.D. +0.4
carbon source Ying_all64 rep B; time point 3 -2.7 -0.1 +0.0 N.D. +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.7 +0.3 +0.0 N.D. -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.5 +0.2 +0.1 N.D. -0.3
stress Cobalt chloride 10 uM, aerobic -2.3 +0.0 -0.5 N.D. +0.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -2.3 +0.0 -0.5 N.D. +0.5
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -2.5 +0.1 -0.5 N.D. +0.7
carbon source Ying_all64 rep A; time point 3 -2.8 +0.2 +0.0 N.D. +0.6
stress Uranyl Acetate Dihydrate 200 uM, aerobic -2.2 +0.1 -0.6 N.D. +0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.5 +0.1 +0.1 N.D. +0.3
carbon source Ying_all64 rep C; time point 2 -2.7 +0.3 -0.1 N.D. +0.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.2 -0.4 +0.1 N.D. +0.6
stress Cadmium acetate 8 uM, aerobic -1.9 -0.3 -0.5 N.D. +0.9
no stress control Defined media control, aerobic -2.6 +0.1 -0.2 N.D. +1.0
carbon source Ying_sugar7 rep C; time point 2 -2.1 -0.1 -0.5 N.D. +1.0
no stress control Defined media control, anaerobic -2.1 -0.1 -0.1 N.D. +0.7
no stress control Defined media control, aerobic -1.8 -0.1 -0.5 N.D. +0.8
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -1.7 -0.1 -0.5 N.D. +0.8
carbon source Ying_sugar7 rep C; time point 3 -1.7 -0.4 -0.3 N.D. +0.9
no stress control Defined media control, aerobic -2.4 +0.2 -0.2 N.D. +1.1
no stress control Defined media control, aerobic -1.7 -0.1 -0.3 N.D. +0.8
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -1.6 -0.0 -0.5 N.D. +1.3
stress Uranyl Acetate Dihydrate 200 uM, aerobic -1.5 +0.3 -0.7 N.D. +1.0
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