Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_04805 and IAI47_04810 are separated by 186 nucleotidesIAI47_04810 and IAI47_04815 are separated by 84 nucleotidesIAI47_04815 and IAI47_04820 are separated by 122 nucleotidesIAI47_04820 and IAI47_04825 are separated by 59 nucleotides IAI47_04805: IAI47_04805 - outer membrane protein assembly factor BamE, at 1,008,509 to 1,008,856 _04805 IAI47_04810: IAI47_04810 - DNA repair protein RecN, at 1,009,043 to 1,010,704 _04810 IAI47_04815: IAI47_04815 - NAD(+) kinase, at 1,010,789 to 1,011,667 _04815 IAI47_04820: IAI47_04820 - nucleotide exchange factor GrpE, at 1,011,790 to 1,012,371 _04820 IAI47_04825: IAI47_04825 - uracil-DNA glycosylase, at 1,012,431 to 1,013,111 _04825
Group Condition IAI47_04805 IAI47_04810 IAI47_04815 IAI47_04820 IAI47_04825
carbon source Ying_AminoAcid20 rep A; time point 3 -1.8 -0.2 N.D. N.D. -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 -0.4 N.D. N.D. -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 -1.0 N.D. N.D. -0.0
carbon source Ying_AminoAcid20 rep B; time point 3 -1.6 -0.3 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.2 N.D. N.D. -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -1.4 +0.1 N.D. N.D. -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.2 N.D. N.D. -0.5
carbon source Ying_AminoAcid20 rep C; time point 2 -1.2 -0.1 N.D. N.D. -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 -0.2 N.D. N.D. -0.4
carbon source Ying_Others16 rep C; time point 3 -1.5 -0.0 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 -0.1 N.D. N.D. +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 -0.9 N.D. N.D. +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 -0.3 N.D. N.D. +0.1
carbon source Ying_Others16 rep A; time point 3 -1.5 -0.2 N.D. N.D. +0.1
carbon source Ying_all64 rep B; time point 3 -1.3 -0.1 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.2 N.D. N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.2 N.D. N.D. -0.4
carbon source Ying_AminoAcid20 rep C; time point 3 -1.1 -0.3 N.D. N.D. +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 -0.6 N.D. N.D. +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.6 N.D. N.D. +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 -0.2 N.D. N.D. +0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 -1.2 +0.2 N.D. N.D. -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 +0.1 N.D. N.D. +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.3 +0.1 N.D. N.D. +0.1
stress copper (II) chloride 5 uM, aerobic -1.4 +0.1 N.D. N.D. +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 +0.1 N.D. N.D. +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 +0.2 N.D. N.D. +0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.9 +0.2 N.D. N.D. +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.9 -0.2 N.D. N.D. -0.4
stress copper (II) chloride 2 uM, anaerobic +1.2 +0.0 N.D. N.D. +0.4
remove
IAI47_04805
plot		 remove
IAI47_04810
plot		 remove
IAI47_04815		 remove
IAI47_04820
plot		 remove
IAI47_04825
plot