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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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500 nt
IAI47_04465 and IAI47_04470 are separated by 348 nucleotides
IAI47_04470 and IAI47_04475 are separated by 99 nucleotides
IAI47_04475 and IAI47_04480 are separated by 139 nucleotides
IAI47_04480 and IAI47_04485 are separated by 82 nucleotides
IAI47_04465: IAI47_04465 - MFS transporter, at 937,351 to 938,640
_04465
IAI47_04470: IAI47_04470 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 938,989 to 940,344
_04470
IAI47_04475: IAI47_04475 - bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase, at 940,444 to 943,119
_04475
IAI47_04480: IAI47_04480 - DTW domain-containing protein, at 943,259 to 943,936
_04480
IAI47_04485: IAI47_04485 - thioredoxin TrxC, at 944,019 to 944,438
_04485
Group
Condition
IAI47
_04465
IAI47
_04470
IAI47
_04475
IAI47
_04480
IAI47
_04485
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.4
N.D.
-0.1
-0.2
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.3
N.D.
-0.2
-0.0
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-1.1
N.D.
-0.1
-0.5
+0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.0
N.D.
-0.2
-0.4
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.0
N.D.
-0.2
-0.2
+0.0
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
N.D.
+0.1
-0.5
-0.0
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.1
N.D.
-0.1
-0.5
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.1
N.D.
-0.2
-0.1
+0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
N.D.
+0.2
-0.6
-0.0
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.5
N.D.
+0.0
+0.1
+0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
N.D.
+0.0
-0.5
+0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
N.D.
+0.2
-0.1
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.9
N.D.
-0.1
-0.2
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.9
N.D.
-0.2
-0.1
+0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.0
N.D.
-0.1
-0.1
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
N.D.
-0.5
+0.1
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-0.9
N.D.
-0.1
+0.3
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
N.D.
-0.2
+0.1
+0.1
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
N.D.
+0.1
+0.0
-1.1
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
N.D.
-0.2
+0.1
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
N.D.
-0.2
+0.2
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-0.8
N.D.
-0.1
+0.1
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
N.D.
+0.0
-0.2
+0.4
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
N.D.
-0.2
+0.3
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.8
N.D.
-0.0
+0.2
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-0.7
N.D.
-0.1
+0.2
+0.4
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.0
N.D.
-0.2
-0.2
+1.1
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
N.D.
-0.2
-0.1
+1.0
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.1
N.D.
-0.2
-0.0
+1.0
stress
copper (II) chloride 2 uM, anaerobic
+0.0
N.D.
-0.1
+0.6
+0.6
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