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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_04335 and IAI47_04340 are separated by 452 nucleotides
IAI47_04340 and IAI47_04345 overlap by 4 nucleotides
IAI47_04345 and IAI47_04350 are separated by 31 nucleotides
IAI47_04350 and IAI47_04355 are separated by 153 nucleotides
IAI47_04335: IAI47_04335 - tRNA-Arg, at 911,244 to 911,320
_04335
IAI47_04340: IAI47_04340 - fructose-1-phosphate/6-phosphogluconate phosphatase, at 911,773 to 912,339
_04340
IAI47_04345: IAI47_04345 - DedA family protein, at 912,336 to 912,764
_04345
IAI47_04350: IAI47_04350 - glutamate--cysteine ligase, at 912,796 to 914,403
_04350
IAI47_04355: IAI47_04355 - S-ribosylhomocysteine lyase, at 914,557 to 915,072
_04355
Group
Condition
IAI47
_04335
IAI47
_04340
IAI47
_04345
IAI47
_04350
IAI47
_04355
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-3.3
-0.3
+0.1
-0.4
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-3.7
+0.0
+0.1
-0.4
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-3.0
-0.2
-0.2
-0.4
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.6
-0.2
+0.1
-0.8
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.3
-0.4
-0.2
-1.3
-0.2
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.7
-0.3
-0.0
-1.1
-0.1
nitrogen source
Ammonium chloride (N)
-3.5
+0.1
+0.3
+0.3
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.6
+0.1
+0.2
-0.8
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-2.6
-0.1
-0.2
-0.3
+0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.8
-0.2
-0.1
-0.7
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-2.0
+0.1
-0.1
-0.4
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.3
+0.1
-0.0
-0.6
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.3
+0.1
-0.0
-0.7
+0.2
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.1
-0.0
-0.1
-0.5
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-2.4
-0.1
+0.1
-0.3
+0.1
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.9
-0.1
+0.0
-1.7
+0.1
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.7
-0.3
-0.4
-0.3
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.5
+0.0
+0.1
-0.3
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-2.1
-0.1
+0.2
-0.3
-0.1
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.2
-0.3
-0.1
-1.0
+0.4
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-2.1
+0.1
-0.0
-0.4
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-2.1
+0.1
-0.0
-0.5
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.0
+0.1
+0.1
-0.4
+0.3
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.0
-0.2
+0.1
-1.4
+0.6
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.9
-0.0
+0.1
-0.4
+0.4
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.6
+0.4
-0.4
-0.2
+0.2
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.4
+0.2
+0.2
-0.4
+0.6
stress
dichromate 5 uM, aerobic
-1.6
+0.2
+0.3
+0.9
-0.1
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.7
-0.4
+0.3
-0.8
+0.7
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.8
-0.0
-0.2
-0.9
+0.2
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IAI47_04345
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