Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_03925 and IAI47_03930 overlap by 4 nucleotidesIAI47_03930 and IAI47_03935 are separated by 191 nucleotidesIAI47_03935 and IAI47_03940 overlap by 4 nucleotidesIAI47_03940 and IAI47_03945 overlap by 4 nucleotides IAI47_03925: IAI47_03925 - prolipoprotein diacylglyceryl transferase, at 818,640 to 819,521 _03925 IAI47_03930: IAI47_03930 - thymidylate synthase, at 819,518 to 820,312 _03930 IAI47_03935: IAI47_03935 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 820,504 to 820,974 _03935 IAI47_03940: IAI47_03940 - prepilin peptidase-dependent protein, at 820,971 to 821,498 _03940 IAI47_03945: IAI47_03945 - DUF2509 family protein, at 821,495 to 821,899 _03945
Group Condition IAI47_03925 IAI47_03930 IAI47_03935 IAI47_03940 IAI47_03945
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.5 -0.1 -0.9
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. +0.1 -0.5 -0.8
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. -0.3 -0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.3 -0.1 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 N.D. N.D. -0.3 -0.3 -0.4
stress copper (II) chloride 2 uM, anaerobic N.D. N.D. -0.5 -0.0 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.5 +0.0 -0.4
nitrogen source nitrogen source nitrite 1mM N.D. N.D. +0.2 -0.2 -0.6
carbon source Ying_Others16 rep B; time point 1 N.D. N.D. -0.5 -0.3 +0.3
no stress control Defined media control, anaerobic N.D. N.D. -0.1 +0.3 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. N.D. +0.4 -0.3 -0.5
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 +0.4 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.3 +0.4 -0.3
stress Nickel (II) chloride 20 uM, anaerobic N.D. N.D. +0.2 +0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.0 +0.5 -0.6
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. -0.2 -0.4 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.3 -0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 N.D. N.D. +0.2 +0.3 -0.5
stress copper (II) chloride 2 uM, anaerobic N.D. N.D. +0.1 -0.5 +0.5
nitrogen source TNT (N) N.D. N.D. +0.1 +0.6 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.2 -0.5 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 N.D. N.D. +0.3 +0.4 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.1 +0.8 -0.2
stress copper (II) chloride 2 uM, anaerobic N.D. N.D. +0.5 +0.4 -0.4
carbon source Ying_Nucleobase14 rep A; time point 2 N.D. N.D. +0.2 -0.2 +0.5
carbon source Ying_AminoAcid20 rep C; time point 2 N.D. N.D. +0.2 -0.2 +0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.0 -0.0 +0.9
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.1 +0.0 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. +0.4 +0.3 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. +0.3 +0.6 +0.3
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