Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_03710 and IAI47_03715 are separated by 30 nucleotidesIAI47_03715 and IAI47_03720 are separated by 181 nucleotidesIAI47_03720 and IAI47_03725 are separated by 279 nucleotidesIAI47_03725 and IAI47_03730 are separated by 256 nucleotides IAI47_03710: IAI47_03710 - oxidative stress defense protein, at 774,601 to 775,326 _03710 IAI47_03715: IAI47_03715 - LysR family transcriptional regulator ArgP, at 775,357 to 776,262 _03715 IAI47_03720: IAI47_03720 - ribose-5-phosphate isomerase RpiA, at 776,444 to 777,103 _03720 IAI47_03725: IAI47_03725 - phosphoglycerate dehydrogenase, at 777,383 to 778,621 _03725 IAI47_03730: IAI47_03730 - 5-formyltetrahydrofolate cyclo-ligase, at 778,878 to 779,471 _03730
Group Condition IAI47_03710 IAI47_03715 IAI47_03720 IAI47_03725 IAI47_03730
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 -2.0 N.D. -4.8 -4.1
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.0 -2.0 N.D. -4.7 -3.9
carbon source Ying_Others16 rep C; time point 3 +0.0 -0.4 N.D. -4.8 -4.3
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.0 -1.1 N.D. -4.6 -3.9
carbon source Ying_Others16 rep B; time point 3 -0.0 -0.3 N.D. -4.9 -4.2
carbon source Ying_Others16 rep A; time point 3 +0.0 +0.0 N.D. -4.8 -4.3
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 -0.8 N.D. -5.1 -2.1
carbon source Ying_Others16 rep C; time point 2 -0.2 -0.3 N.D. -4.9 -2.6
carbon source Ying_sugar7 rep A; time point 3 -0.2 -0.6 N.D. -4.9 -2.2
carbon source Ying_Nucleobase14 rep B; time point 3 -0.0 -0.9 N.D. -5.0 -1.9
carbon source Ying_sugar7 rep B; time point 3 -0.2 -0.4 N.D. -4.8 -2.2
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.0 -1.1 N.D. -5.0 -1.5
carbon source Ying_Nucleobase14 rep A; time point 3 +0.1 -1.1 N.D. -4.8 -1.8
carbon source Ying_Nucleobase14 rep C; time point 3 -0.0 -1.2 N.D. -4.8 -1.4
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.0 -1.2 N.D. -5.0 -1.2
carbon source Ying_Others16 rep B; time point 2 -0.1 -0.1 N.D. -5.1 -2.1
carbon source Ying_Nucleobase14 rep A; time point 2 -0.0 -1.0 N.D. -5.2 -1.1
carbon source Ying_sugar7 rep C; time point 3 +0.2 -0.6 N.D. -4.9 -1.9
carbon source Ying_sugar7 rep A; time point 2 -0.1 -0.6 N.D. -5.4 -1.0
carbon source Ying_Others16 rep A; time point 2 -0.1 -0.0 N.D. -5.0 -1.9
carbon source Ying_sugar7 rep B; time point 2 +0.0 -0.7 N.D. -5.2 -1.0
carbon source Ying_Nucleobase14 rep B; time point 2 +0.1 -0.6 N.D. -5.2 -1.1
carbon source Ying_Nucleobase14 rep C; time point 2 +0.0 -0.3 N.D. -5.3 -0.8
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.2 -0.2 N.D. -5.4 -0.3
carbon source Ying_all64 rep C; time point 3 +0.1 -1.1 N.D. -3.9 -1.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.1 -0.1 N.D. -5.7 -0.1
nitrogen source Ammonium chloride (N) -0.4 -0.7 N.D. -4.0 -0.5
stress Nickel (II) chloride 40 uM, aerobic +0.1 +0.1 N.D. -5.3 -0.2
stress Cadmium acetate 8 uM, aerobic -0.1 -0.1 N.D. -5.0 +0.3
carbon source Ying_sugar7 rep C; time point 2 -0.1 -0.4 N.D. -4.6 +1.1
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