Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_03650 and IAI47_03655 are separated by 534 nucleotidesIAI47_03655 and IAI47_03660 are separated by 840 nucleotidesIAI47_03660 and IAI47_03665 are separated by 170 nucleotidesIAI47_03665 and IAI47_03670 are separated by 192 nucleotides IAI47_03650: IAI47_03650 - sugar porter family MFS transporter, at 758,200 to 759,597 _03650 IAI47_03655: IAI47_03655 - methionine adenosyltransferase, at 760,132 to 761,283 _03655 IAI47_03660: IAI47_03660 - biosynthetic arginine decarboxylase, at 762,124 to 764,100 _03660 IAI47_03665: IAI47_03665 - agmatinase, at 764,271 to 765,191 _03665 IAI47_03670: IAI47_03670 - DUF937 domain-containing protein, at 765,384 to 765,794 _03670
Group Condition IAI47_03650 IAI47_03655 IAI47_03660 IAI47_03665 IAI47_03670
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 N.D. -0.4 -0.8 -0.9
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 N.D. +0.0 -1.0 -1.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 N.D. -0.2 -0.5 -0.9
carbon source Ying_all64 rep B; time point 3 +0.1 N.D. -0.2 -0.6 -0.8
survival Survival; Treatment=UGA synthetic gw pH3.9; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. -0.1 -1.0 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 N.D. -0.1 -0.4 -0.7
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 N.D. +0.0 -0.9 -0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 N.D. -0.1 -0.7 -0.5
stress copper (II) chloride 2 uM, anaerobic -0.0 N.D. -0.2 -0.2 -0.7
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. -0.0 -0.4 -0.8
carbon source Ying_all64 rep A; time point 3 +0.1 N.D. -0.1 -0.9 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. +0.1 -1.2 +0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. -0.2 -0.8 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 N.D. -0.3 -1.0 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. +0.2 -0.2 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 N.D. +0.1 -0.1 -0.7
carbon source Ying_all64 rep A; time point 2 +0.0 N.D. +0.0 -0.9 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 N.D. -0.2 -0.8 +0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 N.D. +0.1 -0.6 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 N.D. -0.1 -0.3 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. -0.2 -0.6 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. -0.1 +0.5 -0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 N.D. +0.0 -0.8 +0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. -0.3 -0.4 +0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 N.D. -0.2 -0.1 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.2 N.D. +0.0 -0.5 +0.6
stress copper (II) chloride 2 uM, anaerobic +0.3 N.D. +0.3 -0.3 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 N.D. +0.1 +0.6 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. -0.2 +0.4 +0.5
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.1 N.D. +0.1 +0.2 +1.0
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