Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_03580 and IAI47_03585 overlap by 8 nucleotidesIAI47_03585 and IAI47_03590 are separated by 21 nucleotidesIAI47_03590 and IAI47_03595 are separated by 12 nucleotidesIAI47_03595 and IAI47_03600 are separated by 14 nucleotides IAI47_03580: IAI47_03580 - radical SAM family heme chaperone HemW, at 747,276 to 748,415 _03580 IAI47_03585: IAI47_03585 - XTP/dITP diphosphatase, at 748,408 to 749,001 _03585 IAI47_03590: IAI47_03590 - YggT family protein, at 749,023 to 749,577 _03590 IAI47_03595: IAI47_03595 - YggS family pyridoxal phosphate-dependent enzyme, at 749,590 to 750,297 _03595 IAI47_03600: IAI47_03600 - type IV pilus twitching motility protein PilT, at 750,312 to 751,319 _03600
Group Condition IAI47_03580 IAI47_03585 IAI47_03590 IAI47_03595 IAI47_03600
carbon source Ying_Others16 rep C; time point 3 -0.1 -0.5 -0.1 -2.3 -0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.6 -0.2 -0.5 -1.8 -0.3
no stress control Defined media control, aerobic -0.5 -0.7 +0.2 -2.2 +0.1
carbon source Ying_Others16 rep B; time point 3 -0.3 -0.0 -0.1 -2.3 -0.1
carbon source Ying_Others16 rep A; time point 3 -0.2 -0.2 -0.2 -2.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.6 -0.8 -1.1 -0.6 +0.2
nitrogen source nitrogen source Ammonium chloride 20mM -0.2 +0.2 -0.4 -2.3 +0.1
stress Cadmium acetate 8 uM, aerobic -0.1 -0.8 -0.1 -1.6 +0.1
carbon source Ying_Others16 rep C; time point 2 -0.0 -0.5 -0.2 -1.7 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.5 -0.4 -1.1 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.7 -0.1 -1.1 -0.2
no stress control Defined media control, aerobic -0.3 -0.5 -0.1 -1.6 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -1.0 -1.2 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.2 -0.7 -0.6 -1.0 +0.1
no stress control Defined media control, aerobic -0.2 +0.0 -0.2 -2.0 +0.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.3 -0.0 -0.1 -1.9 +0.1
nitrogen source nitrogen source nitrate 5mM -0.0 +0.2 -0.4 -1.7 -0.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.2 +0.1 -0.1 -1.9 -0.0
nitrogen source nitrogen source nitrite 1mM -0.1 +0.2 -0.2 -1.8 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.4 -1.6 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.4 -0.3 -0.9 -0.7 +0.2
carbon source Ying_sugar7 rep C; time point 2 -0.1 -0.0 -0.4 -1.7 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.4 -0.6 -0.6 -0.5 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.3 -1.0 -0.3 +0.4
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 +0.4 +0.1 -2.0 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.1 -1.4 +0.5 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.5 -1.5 -0.5 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.4 -1.6 +0.1 +0.3
stress copper (II) chloride 2 uM, anaerobic +0.0 -0.9 -0.7 +0.3 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.1 -1.2 +1.0 +0.5
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