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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_03580 and IAI47_03585 overlap by 8 nucleotides
IAI47_03585 and IAI47_03590 are separated by 21 nucleotides
IAI47_03590 and IAI47_03595 are separated by 12 nucleotides
IAI47_03595 and IAI47_03600 are separated by 14 nucleotides
IAI47_03580: IAI47_03580 - radical SAM family heme chaperone HemW, at 747,276 to 748,415
_03580
IAI47_03585: IAI47_03585 - XTP/dITP diphosphatase, at 748,408 to 749,001
_03585
IAI47_03590: IAI47_03590 - YggT family protein, at 749,023 to 749,577
_03590
IAI47_03595: IAI47_03595 - YggS family pyridoxal phosphate-dependent enzyme, at 749,590 to 750,297
_03595
IAI47_03600: IAI47_03600 - type IV pilus twitching motility protein PilT, at 750,312 to 751,319
_03600
Group
Condition
IAI47
_03580
IAI47
_03585
IAI47
_03590
IAI47
_03595
IAI47
_03600
carbon source
Ying_Others16 rep C; time point 3
-0.1
-0.5
-0.1
-2.3
-0.2
stress
Uranyl Acetate Dihydrate 200 uM, aerobic
-0.6
-0.2
-0.5
-1.8
-0.3
no stress control
Defined media control, aerobic
-0.5
-0.7
+0.2
-2.2
+0.1
carbon source
Ying_Others16 rep B; time point 3
-0.3
-0.0
-0.1
-2.3
-0.1
carbon source
Ying_Others16 rep A; time point 3
-0.2
-0.2
-0.2
-2.1
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.6
-0.8
-1.1
-0.6
+0.2
nitrogen source
nitrogen source Ammonium chloride 20mM
-0.2
+0.2
-0.4
-2.3
+0.1
stress
Cadmium acetate 8 uM, aerobic
-0.1
-0.8
-0.1
-1.6
+0.1
carbon source
Ying_Others16 rep C; time point 2
-0.0
-0.5
-0.2
-1.7
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-0.5
-0.4
-1.1
-0.1
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
-0.7
-0.1
-1.1
-0.2
no stress control
Defined media control, aerobic
-0.3
-0.5
-0.1
-1.6
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-1.0
-1.2
+0.2
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.2
-0.7
-0.6
-1.0
+0.1
no stress control
Defined media control, aerobic
-0.2
+0.0
-0.2
-2.0
+0.2
stress
Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
-0.3
-0.0
-0.1
-1.9
+0.1
nitrogen source
nitrogen source nitrate 5mM
-0.0
+0.2
-0.4
-1.7
-0.2
stress
Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
-0.2
+0.1
-0.1
-1.9
-0.0
nitrogen source
nitrogen source nitrite 1mM
-0.1
+0.2
-0.2
-1.8
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
-0.4
-1.6
+0.2
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.4
-0.3
-0.9
-0.7
+0.2
carbon source
Ying_sugar7 rep C; time point 2
-0.1
-0.0
-0.4
-1.7
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
-0.4
-0.6
-0.6
-0.5
+0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.6
-0.3
-1.0
-0.3
+0.4
nitrogen source
nitrogen source Ammonium chloride 20mM
-0.1
+0.4
+0.1
-2.0
-0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.4
-0.1
-1.4
+0.5
+0.0
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
+0.5
-1.5
-0.5
+0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.4
-1.6
+0.1
+0.3
stress
copper (II) chloride 2 uM, anaerobic
+0.0
-0.9
-0.7
+0.3
+0.7
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
-0.1
-1.2
+1.0
+0.5
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