Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_03095 and IAI47_03100 are separated by 33 nucleotidesIAI47_03100 and IAI47_03105 are separated by 70 nucleotidesIAI47_03105 and IAI47_03110 are separated by 43 nucleotidesIAI47_03110 and IAI47_03115 are separated by 438 nucleotides IAI47_03095: IAI47_03095 - inorganic triphosphatase, at 639,148 to 640,458 _03095 IAI47_03100: IAI47_03100 - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 640,492 to 643,344 _03100 IAI47_03105: IAI47_03105 - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 643,415 to 644,839 _03105 IAI47_03110: IAI47_03110 - accessory factor UbiK family protein, at 644,883 to 645,269 _03110 IAI47_03115: IAI47_03115 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 645,708 to 646,364 _03115
Group Condition IAI47_03095 IAI47_03100 IAI47_03105 IAI47_03110 IAI47_03115
stress copper (II) chloride 2 uM, anaerobic -1.0 -0.3 N.D. N.D. N.D.
carbon source Ying_sugar7 rep C; time point 2 -0.9 -0.3 N.D. N.D. N.D.
stress copper (II) chloride 2 uM, anaerobic -0.5 -0.6 N.D. N.D. N.D.
carbon source Ying_sugar7 rep B; time point 3 -0.6 -0.5 N.D. N.D. N.D.
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.9 N.D. N.D. N.D.
carbon source Ying_sugar7 rep C; time point 3 -0.5 -0.5 N.D. N.D. N.D.
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.1 -0.9 N.D. N.D. N.D.
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.1 -0.8 N.D. N.D. N.D.
carbon source Ying_sugar7 rep B; time point 2 -0.4 -0.5 N.D. N.D. N.D.
carbon source Ying_sugar7 rep A; time point 2 -0.5 -0.4 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.4 N.D. N.D. N.D.
carbon source Ying_sugar7 rep A; time point 3 -0.4 -0.4 N.D. N.D. N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.7 N.D. N.D. N.D.
no stress control Defined media control, anaerobic +0.1 -0.7 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 -0.7 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 +0.2 -0.7 N.D. N.D. N.D.
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.2 -0.6 N.D. N.D. N.D.
nitrogen source nitrogen source nitrate 20mM -0.6 +0.4 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +1.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.3 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 N.D. N.D. N.D.
carbon source Ying_Others16 rep A; time point 2 +0.3 +0.6 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.4 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +1.1 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.5 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.5 N.D. N.D. N.D.
carbon source Ying_Others16 rep C; time point 2 +0.3 +0.7 N.D. N.D. N.D.
carbon source Ying_Others16 rep A; time point 3 +0.3 +0.9 N.D. N.D. N.D.
carbon source Ying_Others16 rep B; time point 3 +0.4 +0.9 N.D. N.D. N.D.
carbon source Ying_Others16 rep C; time point 3 +0.3 +1.1 N.D. N.D. N.D.
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