Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_03035 and IAI47_03040 are separated by 138 nucleotidesIAI47_03040 and IAI47_03045 overlap by 4 nucleotidesIAI47_03045 and IAI47_03050 are separated by 74 nucleotidesIAI47_03050 and IAI47_03055 are separated by 330 nucleotides IAI47_03035: IAI47_03035 - SDR family oxidoreductase, at 627,089 to 627,880 _03035 IAI47_03040: IAI47_03040 - TetR/AcrR family transcriptional regulator, at 628,019 to 628,603 _03040 IAI47_03045: IAI47_03045 - G/U mismatch-specific DNA glycosylase, at 628,600 to 629,118 _03045 IAI47_03050: IAI47_03050 - RNA polymerase sigma factor RpoD, at 629,193 to 631,034 _03050 IAI47_03055: IAI47_03055 - DNA primase, at 631,365 to 633,110 _03055
Group Condition IAI47_03035 IAI47_03040 IAI47_03045 IAI47_03050 IAI47_03055
nitrogen source Ammonium chloride (N) -0.4 -0.5 -0.3 N.D. N.D.
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.1 -0.6 -0.6 N.D. N.D.
stress copper (II) chloride 2 uM, anaerobic -0.3 -0.6 -0.3 N.D. N.D.
stress dichromate 5 uM, aerobic -0.1 -0.6 -0.2 N.D. N.D.
no stress control Defined media control, aerobic -0.1 -1.0 +0.1 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.0 -0.6 -0.4 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.6 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.5 -0.3 N.D. N.D.
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.1 -0.7 -0.0 N.D. N.D.
stress dichromate 5 uM, aerobic +0.1 -0.6 -0.3 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.5 -0.2 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.7 -0.2 N.D. N.D.
stress Cobalt chloride 10 uM, aerobic +0.1 -0.8 -0.1 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 +0.1 -0.5 -0.2 N.D. N.D.
stress Uranyl Acetate Dihydrate 200 uM, anaerobic -0.1 -0.6 +0.1 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.5 -0.1 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.6 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.5 +0.5 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 +0.2 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 +0.4 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.4 N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.8 +0.3 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.5 +0.3 N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.4 -0.1 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.6 +0.5 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.1 -0.7 +0.5 N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 +0.6 N.D. N.D.
nitrogen source TNT (N) +0.0 +0.6 -0.2 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.1 +0.7 N.D. N.D.
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.4 N.D. N.D.
remove
IAI47_03035
plot		 remove
IAI47_03040
plot		 remove
IAI47_03045		 remove
IAI47_03050
plot		 remove
IAI47_03055
plot