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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_02605 and IAI47_02610 are separated by 56 nucleotides
IAI47_02610 and IAI47_02615 are separated by 164 nucleotides
IAI47_02615 and IAI47_02620 are separated by 218 nucleotides
IAI47_02620 and IAI47_02625 are separated by 16 nucleotides
IAI47_02605: IAI47_02605 - protease modulator HflC, at 539,462 to 540,466
_02605
IAI47_02610: IAI47_02610 - DUF2065 domain-containing protein, at 540,523 to 540,723
_02610
IAI47_02615: IAI47_02615 - adenylosuccinate synthase, at 540,888 to 542,186
_02615
IAI47_02620: IAI47_02620 - nitric oxide-sensing transcriptional repressor NsrR, at 542,405 to 542,848
_02620
IAI47_02625: IAI47_02625 - ribonuclease R, at 542,865 to 545,354
_02625
Group
Condition
IAI47
_02605
IAI47
_02610
IAI47
_02615
IAI47
_02620
IAI47
_02625
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.3
+0.2
N.D.
+0.8
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-1.0
-0.1
N.D.
+0.1
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-1.1
-0.1
N.D.
+0.2
-0.7
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-1.0
-0.2
N.D.
+0.1
-0.6
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
-1.0
N.D.
+0.2
-0.5
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.0
-0.2
N.D.
+0.4
-0.7
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.8
-0.1
N.D.
+0.2
-0.7
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.2
+0.1
N.D.
+0.2
-0.5
carbon source
Ying_Nucleobase14 rep A; time point 3
+0.7
-0.1
N.D.
-0.5
-1.3
carbon source
Ying_Nucleobase14 rep C; time point 3
+0.7
-0.0
N.D.
-0.4
-1.3
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
+0.2
N.D.
+0.4
-0.8
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.6
-0.1
N.D.
-0.3
-1.2
carbon source
Ying_Nucleobase14 rep B; time point 3
+0.8
+0.1
N.D.
-0.5
-1.3
carbon source
Ying_sugar7 rep A; time point 3
+0.6
-0.4
N.D.
-0.1
-0.9
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.6
-0.1
N.D.
-0.2
-1.0
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
+0.3
N.D.
+0.4
-0.9
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.6
+0.1
N.D.
-0.2
-1.0
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
+0.4
N.D.
+0.5
-0.8
carbon source
Ying_sugar7 rep B; time point 2
+0.8
-0.3
N.D.
-0.1
-0.7
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.5
-0.5
N.D.
+1.4
-0.6
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
-0.3
N.D.
+1.1
-0.3
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
-0.0
N.D.
+1.1
-0.5
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.5
-0.2
N.D.
+1.2
-0.5
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
+0.2
N.D.
+1.3
-0.6
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
-0.3
N.D.
+1.3
-0.5
carbon source
Ying_sugar7 rep C; time point 2
+0.8
+0.1
N.D.
+0.1
-0.9
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.5
+0.1
N.D.
+1.3
-0.7
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.5
-0.1
N.D.
+1.4
-0.4
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.5
N.D.
+0.5
-0.8
carbon source
Ying_all64 rep B; time point 3
+1.2
+0.3
N.D.
+0.1
-0.3
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