Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_02515 and IAI47_02520 are separated by 440 nucleotidesIAI47_02520 and IAI47_02525 are separated by 49 nucleotidesIAI47_02525 and IAI47_02530 are separated by 14 nucleotidesIAI47_02530 and IAI47_02535 are separated by 171 nucleotides IAI47_02515: IAI47_02515 - transcriptional regulator ArgR, at 519,774 to 520,244 _02515 IAI47_02520: IAI47_02520 - malate dehydrogenase, at 520,685 to 521,623 _02520 IAI47_02525: IAI47_02525 - miniconductance mechanosensitive channel MscM, at 521,673 to 525,002 _02525 IAI47_02530: IAI47_02530 - phosphatidylserine decarboxylase, at 525,017 to 525,916 _02530 IAI47_02535: IAI47_02535 - small ribosomal subunit biogenesis GTPase RsgA, at 526,088 to 527,137 _02535
Group Condition IAI47_02515 IAI47_02520 IAI47_02525 IAI47_02530 IAI47_02535
carbon source Ying_Others16 rep A; time point 3 -3.7 -4.0 +0.0 N.D. N.D.
carbon source Ying_Others16 rep B; time point 3 -3.5 -4.1 -0.0 N.D. N.D.
carbon source Ying_Others16 rep C; time point 3 -3.6 -4.0 -0.0 N.D. N.D.
carbon source Ying_Others16 rep A; time point 2 -3.3 -3.0 +0.0 N.D. N.D.
carbon source Ying_Others16 rep C; time point 2 -3.1 -3.0 -0.1 N.D. N.D.
carbon source Ying_Others16 rep B; time point 2 -2.8 -2.6 +0.0 N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 -2.8 -1.8 -0.0 N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 -3.0 -1.4 -0.0 N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 -2.1 -1.9 -0.1 N.D. N.D.
carbon source Ying_Others16 rep A; time point 1 -2.4 -1.4 -0.1 N.D. N.D.
carbon source Ying_Others16 rep C; time point 1 -2.0 -1.7 +0.1 N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 -2.1 -1.3 -0.0 N.D. N.D.
carbon source Ying_Others16 rep B; time point 1 -1.8 -1.4 -0.0 N.D. N.D.
carbon source Ying_all64 rep C; time point 3 -2.1 -0.5 -0.2 N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 2 -1.7 -1.1 -0.0 N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 2 -1.8 -0.8 +0.0 N.D. N.D.
carbon source Ying_all64 rep A; time point 3 -1.8 -0.3 -0.1 N.D. N.D.
carbon source Ying_all64 rep B; time point 3 -1.8 -0.3 -0.0 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 -0.6 -0.3 N.D. N.D.
carbon source Ying_Nucleobase14 rep A; time point 3 -0.8 -1.1 +0.0 N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 -0.3 -0.0 N.D. N.D.
carbon source Ying_all64 rep C; time point 2 -1.4 -0.3 -0.1 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.7 +0.1 -0.0 N.D. N.D.
carbon source Ying_all64 rep A; time point 2 -1.4 -0.3 +0.1 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.7 +0.2 -0.0 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 -0.1 +0.1 N.D. N.D.
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.7 +0.2 +0.1 N.D. N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 +0.2 -0.0 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 -0.1 +0.2 N.D. N.D.
carbon source Ying_sugar7 rep A; time point 3 -1.4 +0.3 +0.0 N.D. N.D.
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