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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_02365 and IAI47_02370 are separated by 15 nucleotides
IAI47_02370 and IAI47_02375 are separated by 67 nucleotides
IAI47_02375 and IAI47_02380 are separated by 546 nucleotides
IAI47_02380 and IAI47_02385 are separated by 23 nucleotides
IAI47_02365: IAI47_02365 - amino acid ABC transporter permease, at 486,899 to 487,999
_02365
IAI47_02370: IAI47_02370 - amino acid ABC transporter permease, at 488,015 to 489,193
_02370
IAI47_02375: IAI47_02375 - amino acid ABC transporter substrate-binding protein, at 489,261 to 490,286
_02375
IAI47_02380: IAI47_02380 - DNA-binding transcriptional regulator Fis, at 490,833 to 491,129
_02380
IAI47_02385: IAI47_02385 - tRNA dihydrouridine synthase DusB, at 491,153 to 492,118
_02385
Group
Condition
IAI47
_02365
IAI47
_02370
IAI47
_02375
IAI47
_02380
IAI47
_02385
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.0
+0.0
-3.8
-0.9
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.1
+0.0
-4.0
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.1
-0.5
-0.2
-2.2
-0.9
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.2
-0.2
-2.9
-0.9
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.1
-0.1
-2.7
-0.7
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.1
+0.1
-3.2
-0.3
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.2
+0.0
-3.2
-0.1
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.2
+0.2
-3.0
-0.8
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
-0.6
-0.4
-1.6
-0.2
stress
Defined media, anaerobic, with FW301 groundwater
+0.0
-0.1
-0.0
-3.1
-0.0
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.2
-0.0
-2.8
-0.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-0.1
+0.1
-2.8
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.5
-0.7
-0.5
-1.3
-0.1
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.1
-0.0
-2.6
-0.2
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
+0.0
+0.0
-1.9
-1.0
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.0
-0.0
-1.9
-0.9
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.0
+0.1
-2.1
-0.6
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.3
-0.1
-1.5
-1.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
-1.0
-0.7
+0.6
+0.8
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
-0.8
-0.5
+0.5
+0.7
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
-0.7
-0.6
+1.0
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
-0.7
-0.6
+0.5
+1.0
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
-0.7
-0.5
+1.0
+0.4
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.5
-0.5
-0.3
+1.3
+0.4
carbon source
Ying_Others16 rep C; time point 3
+0.5
+0.4
+0.4
+1.5
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.7
+0.6
+0.7
+0.9
+0.2
carbon source
Ying_OrganicAcid7 rep C; time point 3
+1.1
+1.1
+0.9
+0.3
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 3
+1.2
+1.1
+1.0
+0.3
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 3
+1.2
+1.1
+0.9
+0.5
+0.2
stress
copper (II) chloride 2 uM, anaerobic
+0.2
+0.3
-0.1
+2.7
+0.7
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