Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_02365 and IAI47_02370 are separated by 15 nucleotidesIAI47_02370 and IAI47_02375 are separated by 67 nucleotidesIAI47_02375 and IAI47_02380 are separated by 546 nucleotidesIAI47_02380 and IAI47_02385 are separated by 23 nucleotides IAI47_02365: IAI47_02365 - amino acid ABC transporter permease, at 486,899 to 487,999 _02365 IAI47_02370: IAI47_02370 - amino acid ABC transporter permease, at 488,015 to 489,193 _02370 IAI47_02375: IAI47_02375 - amino acid ABC transporter substrate-binding protein, at 489,261 to 490,286 _02375 IAI47_02380: IAI47_02380 - DNA-binding transcriptional regulator Fis, at 490,833 to 491,129 _02380 IAI47_02385: IAI47_02385 - tRNA dihydrouridine synthase DusB, at 491,153 to 492,118 _02385
Group Condition IAI47_02365 IAI47_02370 IAI47_02375 IAI47_02380 IAI47_02385
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.0 +0.0 -3.8 -0.9
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.0 -4.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.1 -0.5 -0.2 -2.2 -0.9
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.2 -2.9 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 -0.1 -2.7 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.1 +0.1 -3.2 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.2 +0.0 -3.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.2 -3.0 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.6 -0.4 -1.6 -0.2
stress Defined media, anaerobic, with FW301 groundwater +0.0 -0.1 -0.0 -3.1 -0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.0 -2.8 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.1 +0.1 -2.8 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.7 -0.5 -1.3 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.0 -2.6 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.0 +0.0 -1.9 -1.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.0 -0.0 -1.9 -0.9
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.0 +0.1 -2.1 -0.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.1 -1.5 -1.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 -1.0 -0.7 +0.6 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 -0.8 -0.5 +0.5 +0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.7 -0.6 +1.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 -0.7 -0.6 +0.5 +1.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.7 -0.5 +1.0 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.5 -0.5 -0.3 +1.3 +0.4
carbon source Ying_Others16 rep C; time point 3 +0.5 +0.4 +0.4 +1.5 +0.2
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.7 +0.6 +0.7 +0.9 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 +1.1 +1.1 +0.9 +0.3 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 +1.2 +1.1 +1.0 +0.3 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 +1.2 +1.1 +0.9 +0.5 +0.2
stress copper (II) chloride 2 uM, anaerobic +0.2 +0.3 -0.1 +2.7 +0.7
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