Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_02330 and IAI47_02335 are separated by 82 nucleotidesIAI47_02335 and IAI47_02340 are separated by 221 nucleotidesIAI47_02340 and IAI47_02345 are separated by 182 nucleotidesIAI47_02345 and IAI47_02350 are separated by 14 nucleotides IAI47_02330: IAI47_02330 - 16S ribosomal RNA, at 480,510 to 482,056 _02330 IAI47_02335: IAI47_02335 - tRNA-Glu, at 482,139 to 482,213 _02335 IAI47_02340: IAI47_02340 - 23S ribosomal RNA, at 482,435 to 485,369 _02340 IAI47_02345: IAI47_02345 - 5S ribosomal RNA, at 485,552 to 485,667 _02345 IAI47_02350: IAI47_02350 - tRNA-Thr, at 485,682 to 485,757 _02350
Group Condition IAI47_02330 IAI47_02335 IAI47_02340 IAI47_02345 IAI47_02350
carbon source Ying_sugar7 rep C; time point 2 N.D. N.D. N.D. -1.6 -4.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -1.9 -3.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -3.5 -2.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -3.9 -1.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.5 -4.7
stress copper (II) chloride 2 uM, anaerobic N.D. N.D. N.D. -0.4 -4.4
no stress control Defined media control, aerobic N.D. N.D. N.D. +0.4 -5.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -2.6 -1.9
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.4 -4.7
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -2.6 -1.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -2.6 -1.5
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.7 -3.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -1.3 -2.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -3.9 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -1.1 -2.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -2.3 -1.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -2.8 -0.7
carbon source Ying_Others16 rep C; time point 1 N.D. N.D. N.D. -0.1 -3.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -2.0 -1.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -2.6 -0.7
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.4 -3.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +1.8 -4.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -2.7 +1.0
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.8 -2.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -1.9 +2.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.1 +3.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.6 +3.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +2.3 +1.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +2.0 +2.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +2.9 +3.0
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IAI47_02330
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IAI47_02335
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IAI47_02345
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IAI47_02350
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