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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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500 nt
IAI47_02145 and IAI47_02150 are separated by 12 nucleotides
IAI47_02150 and IAI47_02155 overlap by 1 nucleotides
IAI47_02155 and IAI47_02160 overlap by 1 nucleotides
IAI47_02160 and IAI47_02165 are separated by 388 nucleotides
IAI47_02145: IAI47_02145 - 30S ribosomal protein S3, at 457,559 to 458,257
_02145
IAI47_02150: IAI47_02150 - 50S ribosomal protein L16, at 458,270 to 458,680
_02150
IAI47_02155: IAI47_02155 - 50S ribosomal protein L29, at 458,680 to 458,871
_02155
IAI47_02160: IAI47_02160 - 30S ribosomal protein S17, at 458,871 to 459,125
_02160
IAI47_02165: IAI47_02165 - 8-oxoguanine deaminase, at 459,514 to 460,866
_02165
Group
Condition
IAI47
_02145
IAI47
_02150
IAI47
_02155
IAI47
_02160
IAI47
_02165
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.4
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.3
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
-0.2
stress
Uranyl Acetate Dihydrate 200 uM, aerobic
N.D.
N.D.
N.D.
N.D.
+0.2
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
Ying_sugar7 rep B; time point 2
N.D.
N.D.
N.D.
N.D.
+0.2
stress
copper (II) chloride 2 uM, anaerobic
N.D.
N.D.
N.D.
N.D.
+0.2
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
+0.2
nitrogen source
nitrogen source nitrite 0.5mM
N.D.
N.D.
N.D.
N.D.
+0.2
nitrogen source
nitrogen source nitrite 1mM
N.D.
N.D.
N.D.
N.D.
+0.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
+0.2
nitrogen source
nitrogen source nitrate 5mM
N.D.
N.D.
N.D.
N.D.
+0.2
nitrogen source
nitrogen source nitrate 20mM
N.D.
N.D.
N.D.
N.D.
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
+0.2
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
+0.2
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
N.D.
N.D.
+0.3
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