Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_02005 and IAI47_02010 overlap by 4 nucleotidesIAI47_02010 and IAI47_02015 overlap by 4 nucleotidesIAI47_02015 and IAI47_02020 are separated by 30 nucleotidesIAI47_02020 and IAI47_02025 are separated by 112 nucleotides IAI47_02005: IAI47_02005 - taurine ABC transporter ATP-binding subunit, at 436,382 to 437,149 _02005 IAI47_02010: IAI47_02010 - taurine ABC transporter permease TauC, at 437,146 to 437,973 _02010 IAI47_02015: IAI47_02015 - taurine dioxygenase, at 437,970 to 438,809 _02015 IAI47_02020: IAI47_02020 - ABC transporter ATP-binding protein, at 438,840 to 440,744 _02020 IAI47_02025: IAI47_02025 - glutathione-regulated potassium-efflux system ancillary protein KefG, at 440,857 to 441,408 _02025
Group Condition IAI47_02005 IAI47_02010 IAI47_02015 IAI47_02020 IAI47_02025
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.6 +0.1 +0.1 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.4 -0.3 -0.0 -0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.0 -0.4 +0.2 -0.1
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.7 -0.1 +0.0 -0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.1 +0.4 +0.3 -0.1
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.3 +0.3 -0.2 -0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.2 -0.2 -0.0 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.6 -0.1 -0.0 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.6 -0.1 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.2 +0.0 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.1 +0.1 +0.4
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.3 +0.6 +0.0 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.1 +0.5 +0.1 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.5 -0.1 -0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.1 -0.1 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.4 +0.4 +0.3 -0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.4 +0.3 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.2 -0.2 +0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.4 +0.2 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.5 -0.1 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 -0.2 +0.0 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.2 +0.4 +0.1 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.4 -0.1 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.1 +0.1 -0.0 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.5 +0.1 -0.0 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.2 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.4 +0.1 +0.0 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.0 +0.4 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.5 +0.1 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.6 +0.5 -0.0 +0.3
remove
IAI47_02005
plot
remove
IAI47_02010
plot
remove
IAI47_02015
remove
IAI47_02020
plot
remove
IAI47_02025
plot