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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_02005 and IAI47_02010 overlap by 4 nucleotides
IAI47_02010 and IAI47_02015 overlap by 4 nucleotides
IAI47_02015 and IAI47_02020 are separated by 30 nucleotides
IAI47_02020 and IAI47_02025 are separated by 112 nucleotides
IAI47_02005: IAI47_02005 - taurine ABC transporter ATP-binding subunit, at 436,382 to 437,149
_02005
IAI47_02010: IAI47_02010 - taurine ABC transporter permease TauC, at 437,146 to 437,973
_02010
IAI47_02015: IAI47_02015 - taurine dioxygenase, at 437,970 to 438,809
_02015
IAI47_02020: IAI47_02020 - ABC transporter ATP-binding protein, at 438,840 to 440,744
_02020
IAI47_02025: IAI47_02025 - glutathione-regulated potassium-efflux system ancillary protein KefG, at 440,857 to 441,408
_02025
Group
Condition
IAI47
_02005
IAI47
_02010
IAI47
_02015
IAI47
_02020
IAI47
_02025
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.6
+0.1
+0.1
-0.2
stress
copper (II) chloride 2 uM, anaerobic
+0.4
-0.3
-0.0
-0.1
-0.3
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.0
-0.4
+0.2
-0.1
stress
copper (II) chloride 2 uM, anaerobic
+0.1
+0.7
-0.1
+0.0
-0.6
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.3
-0.1
+0.4
+0.3
-0.1
stress
Manganese (II) chloride tetrahydrate 50 uM, anaerobic
+0.3
+0.3
-0.2
-0.2
+0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.4
+0.2
-0.2
-0.0
+0.2
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.6
-0.1
-0.0
-0.2
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
+0.6
-0.1
+0.2
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.4
-0.2
+0.0
+0.2
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
+0.3
-0.1
+0.1
+0.4
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.3
+0.6
+0.0
+0.1
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.1
+0.5
+0.1
+0.1
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.5
-0.1
-0.1
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.6
-0.1
-0.1
+0.2
+0.2
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
+0.4
+0.4
+0.3
-0.0
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.4
-0.4
+0.3
+0.3
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.4
+0.2
-0.2
+0.2
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
-0.4
+0.2
+0.3
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
+0.5
-0.1
+0.1
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.3
-0.2
+0.0
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.2
+0.4
+0.1
+0.2
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.4
-0.1
+0.2
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
+0.1
+0.1
-0.0
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.5
+0.1
-0.0
+0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
+0.3
+0.2
+0.1
+0.4
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
+0.4
+0.1
+0.0
+0.1
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.4
+0.4
+0.0
+0.4
+0.1
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.5
+0.1
+0.3
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.6
+0.5
-0.0
+0.3
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