Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_01730 and IAI47_01735 overlap by 8 nucleotidesIAI47_01735 and IAI47_01740 are separated by 8 nucleotidesIAI47_01740 and IAI47_01745 overlap by 1 nucleotidesIAI47_01745 and IAI47_01750 are separated by 359 nucleotides IAI47_01730: IAI47_01730 - biotin-independent malonate decarboxylase subunit beta, at 378,330 to 379,163 _01730 IAI47_01735: IAI47_01735 - malonate decarboxylase acyl carrier protein, at 379,156 to 379,455 _01735 IAI47_01740: IAI47_01740 - triphosphoribosyl-dephospho-CoA synthase, at 379,464 to 380,324 _01740 IAI47_01745: IAI47_01745 - malonate decarboxylase subunit alpha, at 380,324 to 381,979 _01745 IAI47_01750: IAI47_01750 - glycerol-3-phosphate dehydrogenase, at 382,339 to 383,844 _01750
Group Condition IAI47_01730 IAI47_01735 IAI47_01740 IAI47_01745 IAI47_01750
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.4 -0.8 -0.1 -3.9
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.8 -0.1 -3.8
nitrogen source Ammonium chloride (N) -0.1 -0.4 -2.4 -0.1 -1.9
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.3 -0.7 -0.2 -3.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.2 -0.5 +0.0 -3.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.3 +0.0 -0.0 -3.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.9 +0.1 -2.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.4 -0.3 +0.1 -2.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.0 -0.2 -0.0 -3.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.5 +0.7 -0.2 -2.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.1 +0.0 +0.0 -2.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.4 -2.1 +0.1 -1.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 -0.9 -0.0 -1.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 -0.4 +0.0 -2.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.7 +0.0 -1.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.3 -0.2 -0.0 -2.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 +0.5 +0.0 -2.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.2 -1.2 +0.1 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 +1.0 -0.1 -2.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.0 +0.6 -0.2 -1.9
carbon source Ying_Nucleobase14 rep A; time point 1 +0.2 +0.2 -1.3 -0.1 +0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +1.1 -0.0 -1.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.7 +1.1 -0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.4 +1.2 -0.5 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 +1.1 -0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.5 +1.6 -0.1 -0.6
nitrogen source nitrogen source nitrite 0.5mM -0.1 +0.2 +0.7 -0.2 +1.4
nitrogen source nitrogen source nitrate 20mM -0.2 -0.0 +1.1 -0.0 +1.4
nitrogen source nitrogen source nitrite 1mM -0.2 +0.1 +0.8 -0.0 +1.4
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.3 +2.1 +0.2 +0.2
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IAI47_01730
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IAI47_01735
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IAI47_01745
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IAI47_01750
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