Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_01725 and IAI47_01730 overlap by 1 nucleotidesIAI47_01730 and IAI47_01735 overlap by 8 nucleotidesIAI47_01735 and IAI47_01740 are separated by 8 nucleotidesIAI47_01740 and IAI47_01745 overlap by 1 nucleotides IAI47_01725: IAI47_01725 - biotin-independent malonate decarboxylase subunit gamma, at 377,530 to 378,330 _01725 IAI47_01730: IAI47_01730 - biotin-independent malonate decarboxylase subunit beta, at 378,330 to 379,163 _01730 IAI47_01735: IAI47_01735 - malonate decarboxylase acyl carrier protein, at 379,156 to 379,455 _01735 IAI47_01740: IAI47_01740 - triphosphoribosyl-dephospho-CoA synthase, at 379,464 to 380,324 _01740 IAI47_01745: IAI47_01745 - malonate decarboxylase subunit alpha, at 380,324 to 381,979 _01745
Group Condition IAI47_01725 IAI47_01730 IAI47_01735 IAI47_01740 IAI47_01745
nitrogen source Ammonium chloride (N) +0.0 -0.1 -0.4 -2.4 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 -0.4 -0.8 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.3 -0.8 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.5 -0.9 -0.0
stress Cadmium acetate 8 uM, anaerobic +0.2 -0.1 -0.1 -1.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.6 -0.3 +0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.4 -2.1 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.0 +0.3 -1.5 +0.0
carbon source Ying_Nucleobase14 rep A; time point 1 +0.1 +0.2 +0.2 -1.3 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.4 -0.4 +0.5 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 -0.3 -0.9 +0.1
no stress control Defined media control, anaerobic +0.4 +0.2 +0.1 -1.4 -0.0
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.1 -1.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.5 +0.7 -0.2
no stress control Defined media control, anaerobic +0.2 +0.2 +0.1 -1.0 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.1 -0.4 +0.8 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 +0.4 +0.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.1 +0.0 +0.9 -0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.5 -0.7 +1.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.2 -0.4 +0.7 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.2 +1.0 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 +0.5 +0.5 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 +0.4 +1.2 -0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 -0.2 +1.1 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.2 +0.4 +1.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.0 +1.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.1 +1.0 +0.7 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.0 +0.5 +1.6 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.0 +0.6 +1.0 +0.1
stress copper (II) chloride 2 uM, anaerobic +0.5 +0.1 +0.3 +2.1 +0.2
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