Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_01690 and IAI47_01695 are separated by 63 nucleotidesIAI47_01695 and IAI47_01700 are separated by 19 nucleotidesIAI47_01700 and IAI47_01705 are separated by 215 nucleotidesIAI47_01705 and IAI47_01710 overlap by 20 nucleotides IAI47_01690: IAI47_01690 - glucose-1-phosphate adenylyltransferase, at 368,529 to 369,821 _01690 IAI47_01695: IAI47_01695 - glycogen synthase GlgA, at 369,885 to 371,318 _01695 IAI47_01700: IAI47_01700 - glycogen phosphorylase, at 371,338 to 373,785 _01700 IAI47_01705: IAI47_01705 - LysR family transcriptional regulator, at 374,001 to 374,936 _01705 IAI47_01710: IAI47_01710 - malonate decarboxylase subunit epsilon, at 374,917 to 375,819 _01710
Group Condition IAI47_01690 IAI47_01695 IAI47_01700 IAI47_01705 IAI47_01710
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -1.0 -0.8 -0.0 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.1 -0.8 -0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.8 -0.7 -0.0 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.7 -0.6 -0.3 -0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.3 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.8 -0.7 -0.0 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.1 -0.2 -0.4
stress copper (II) chloride 2 uM, anaerobic -0.1 -0.4 -0.1 -0.1 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 -0.1 -0.3 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.7 -0.0 +0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.3 -0.4 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.8 +0.0 +0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.8 -0.0 -0.1 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.4 -0.1 -0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.3 -0.3 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.6 +0.0 -0.0 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.7 +0.1 +0.1 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 +0.0 -0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.4 -0.3 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.5 +0.1 -0.3 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.0 +0.2 +0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.0 -0.5 +0.4 +0.2
nitrogen source TNT (N) +0.2 +0.8 -0.5 +0.1 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.2 +0.3 -0.1 +0.5 -0.3
nitrogen source TNT (N) +0.4 +0.9 -0.7 +0.1 +0.1
nitrogen source TNT (N) +0.2 +0.7 -0.4 +0.2 -0.0
stress copper (II) chloride 2 uM, anaerobic -0.2 +0.1 +0.0 +0.2 +0.6
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.4 +0.6 -0.0 -0.0 -0.1
nitrogen source TNT (N) +0.3 +0.8 -0.6 +0.3 +0.2
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.5 +0.4 -0.0 +0.1 +0.1
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