Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_01675 and IAI47_01680 are separated by 359 nucleotidesIAI47_01680 and IAI47_01685 overlap by 4 nucleotidesIAI47_01685 and IAI47_01690 are separated by 10 nucleotidesIAI47_01690 and IAI47_01695 are separated by 63 nucleotides IAI47_01675: IAI47_01675 - aspartate-semialdehyde dehydrogenase, at 362,887 to 363,996 _01675 IAI47_01680: IAI47_01680 - 1,4-alpha-glucan branching enzyme, at 364,356 to 366,539 _01680 IAI47_01685: IAI47_01685 - glycogen debranching protein GlgX, at 366,536 to 368,518 _01685 IAI47_01690: IAI47_01690 - glucose-1-phosphate adenylyltransferase, at 368,529 to 369,821 _01690 IAI47_01695: IAI47_01695 - glycogen synthase GlgA, at 369,885 to 371,318 _01695
Group Condition IAI47_01675 IAI47_01680 IAI47_01685 IAI47_01690 IAI47_01695
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.0 -0.7 -0.0 -1.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.0 -0.5 +0.1 -1.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.1 -0.3 -0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.9 -0.5 +0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.9 -0.5 +0.0 -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.5 -0.3 -0.2 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.4 -0.1 -0.2 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 -0.2 -0.3 -0.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 -0.4 -0.3 -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.4 -0.5 -0.2 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 -0.3 -0.2 -0.7
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. -0.4 -0.4 -0.2 -0.4
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. -0.3 -0.2 -0.2 -0.4
carbon source Ying_all64 rep C; time point 3 N.D. -0.3 -0.2 -0.2 -0.4
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. -0.4 -0.2 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 -0.2 +0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.4 +0.1 -0.2 -0.4
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic N.D. +0.3 +0.3 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.5 +0.3 -0.0 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. +0.3 +0.2 +0.2 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 1 N.D. +0.3 +0.3 +0.3 +0.3
carbon source Ying_OrganicAcid7 rep B; time point 1 N.D. +0.4 +0.3 +0.3 +0.3
carbon source Ying_OrganicAcid7 rep C; time point 1 N.D. +0.3 +0.3 +0.3 +0.3
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. +0.5 +0.4 +0.3 +0.5
carbon source Ying_OrganicAcid7 rep A; time point 2 N.D. +0.6 +0.2 +0.5 +0.4
nitrogen source TNT (N) N.D. +0.6 +0.3 +0.2 +0.7
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. +0.6 +0.4 +0.4 +0.6
nitrogen source TNT (N) N.D. +0.7 +0.3 +0.2 +0.8
nitrogen source TNT (N) N.D. +0.8 +0.3 +0.3 +0.8
nitrogen source TNT (N) N.D. +0.8 +0.3 +0.4 +0.9
remove
IAI47_01675
plot		 remove
IAI47_01680
plot		 remove
IAI47_01685		 remove
IAI47_01690
plot		 remove
IAI47_01695
plot