Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_01485 and IAI47_01490 are separated by 62 nucleotidesIAI47_01490 and IAI47_01495 are separated by 47 nucleotidesIAI47_01495 and IAI47_01500 are separated by 49 nucleotidesIAI47_01500 and IAI47_01505 are separated by 323 nucleotides IAI47_01485: IAI47_01485 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing), at 323,971 to 325,911 _01485 IAI47_01490: IAI47_01490 - Gfo/Idh/MocA family oxidoreductase, at 325,974 to 326,984 _01490 IAI47_01495: IAI47_01495 - myo-inosose-2 dehydratase, at 327,032 to 327,928 _01495 IAI47_01500: IAI47_01500 - DcrB family lipoprotein, at 327,978 to 328,532 _01500 IAI47_01505: IAI47_01505 - 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter, at 328,856 to 329,521 _01505
Group Condition IAI47_01485 IAI47_01490 IAI47_01495 IAI47_01500 IAI47_01505
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 -0.3 -0.9 -0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.3 +0.1 -0.6 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.4 +0.1 -0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.0 +0.1 -0.5 -0.4
stress copper (II) chloride 2 uM, anaerobic -0.0 +0.3 -0.8 -0.6 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.3 -0.4 -0.6 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.2 -0.4 +0.4 -0.6
survival Survival; Treatment=UGA synthetic gw pH3.9; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.2 -0.4 -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.4 +0.2 +0.0 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.1 +0.5 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.5 +0.3 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.1 -0.5 -0.8 +0.7 +0.4
nitrogen source Ammonium chloride (N) -0.1 -0.3 +0.3 +0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.2 +0.7 -0.1
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.3 +0.1 -0.3 +0.6 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.1 -0.0 -0.3 +0.9 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.3 +0.6 -0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.2 +0.2 +1.3 -0.8
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.3 +0.3 -0.3 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.0 -0.5 +0.7 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.5 +0.6 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.6 +0.6 +0.2
carbon source Ying_all64 rep A; time point 3 +0.3 +0.4 +0.3 -0.5 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.0 +0.9 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.0 +0.2 +0.9 -0.2
carbon source Ying_all64 rep B; time point 3 +0.3 +0.2 +0.4 -0.5 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.0 -0.4 +0.7 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 -0.1 +0.6 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.1 +1.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.2 +0.6 +0.2
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IAI47_01485
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IAI47_01490
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IAI47_01500
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IAI47_01505
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