Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_01350 and IAI47_01355 are separated by 56 nucleotidesIAI47_01355 and IAI47_01360 are separated by 414 nucleotidesIAI47_01360 and IAI47_01365 are separated by 37 nucleotidesIAI47_01365 and IAI47_01370 are separated by 242 nucleotides IAI47_01350: IAI47_01350 - 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ, at 292,244 to 292,990 _01350 IAI47_01355: IAI47_01355 - universal stress protein UspA, at 293,047 to 293,484 _01355 IAI47_01360: IAI47_01360 - universal stress protein UspB, at 293,899 to 294,234 _01360 IAI47_01365: IAI47_01365 - inorganic phosphate transporter PitA, at 294,272 to 295,774 _01365 IAI47_01370: IAI47_01370 - NAD(P)/FAD-dependent oxidoreductase, at 296,017 to 297,201 _01370
Group Condition IAI47_01350 IAI47_01355 IAI47_01360 IAI47_01365 IAI47_01370
nitrogen source nitrogen source nitrate 20mM -0.1 -0.0 -0.2 -4.3 -0.2
carbon source Ying_Nucleobase14 rep B; time point 2 -0.6 -0.2 -0.3 -2.7 -0.3
carbon source Ying_sugar7 rep B; time point 2 -0.3 -0.2 +0.3 -3.7 -0.1
carbon source Ying_sugar7 rep A; time point 2 -0.6 -0.0 +0.3 -3.7 -0.1
carbon source Ying_sugar7 rep C; time point 2 -0.6 -0.0 +0.1 -3.2 -0.0
carbon source Ying_Nucleobase14 rep B; time point 3 -0.4 +0.0 +0.0 -3.2 -0.2
carbon source Ying_AminoAcid20 rep B; time point 1 -0.4 -0.0 +0.1 -3.2 -0.3
carbon source Ying_all64 rep B; time point 2 -0.6 +0.0 +0.2 -3.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.2 -0.4 -0.3 -1.5 -0.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.1 -0.1 -0.2 -3.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.6 +0.0 +0.0 -3.0 +0.1
carbon source Ying_sugar7 rep B; time point 1 -0.4 +0.1 +0.1 -3.2 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -1.5 -0.1 -1.7 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.2 -0.1 -2.5 +0.3
carbon source Ying_sugar7 rep C; time point 3 -0.5 +0.3 +0.2 -2.8 -0.1
carbon source Ying_sugar7 rep A; time point 3 -0.4 +0.2 +0.4 -2.7 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -3.8 +0.2 +1.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -1.2 -0.5 +1.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -1.4 -0.5 +2.0 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -1.0 -0.8 +1.6 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -3.0 -0.0 +2.3 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -2.3 +0.2 +1.4 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 -0.8 -0.6 +1.5 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -2.4 +0.2 +2.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -3.1 +0.2 +2.8 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.8 -0.5 +2.4 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -2.1 +0.3 +2.7 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -1.3 -0.2 +3.2 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.3 +0.2 +2.8 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.1 -0.2 +3.0 -0.2
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