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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_01230 and IAI47_01235 overlap by 1 nucleotides
IAI47_01235 and IAI47_01240 overlap by 4 nucleotides
IAI47_01240 and IAI47_01245 are separated by 10 nucleotides
IAI47_01245 and IAI47_01250 are separated by 16 nucleotides
IAI47_01230: IAI47_01230 - K(+)-transporting ATPase subunit F, at 264,218 to 264,307
_01230
IAI47_01235: IAI47_01235 - potassium-transporting ATPase subunit KdpA, at 264,307 to 265,995
_01235
IAI47_01240: IAI47_01240 - potassium-transporting ATPase subunit KdpB, at 265,992 to 268,040
_01240
IAI47_01245: IAI47_01245 - potassium-transporting ATPase subunit KdpC, at 268,051 to 268,617
_01245
IAI47_01250: IAI47_01250 - two-component system sensor histidine kinase KdbD, at 268,634 to 271,309
_01250
Group
Condition
IAI47
_01230
IAI47
_01235
IAI47
_01240
IAI47
_01245
IAI47
_01250
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
-0.4
-0.2
-0.3
+0.1
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.3
-0.2
+0.2
-0.7
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.1
-0.4
-0.5
+0.1
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-0.3
+0.2
-0.3
-0.0
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.0
-0.7
-0.1
+0.1
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
+0.1
-0.5
-0.5
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
-0.0
+0.5
-0.5
-0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
-0.1
-0.3
-0.2
-0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.1
-0.4
-0.3
+0.1
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.2
+0.5
-0.1
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.0
+0.3
-0.3
-0.3
+0.3
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.3
-0.2
+0.3
-0.1
stress
copper (II) chloride 2 uM, anaerobic
+0.1
-0.1
+0.5
-0.4
+0.1
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-0.0
+0.7
-0.2
-0.1
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
+0.2
+0.4
-0.2
-0.2
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.3
-0.0
+0.4
-0.4
+0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.2
+0.4
-0.1
-0.1
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.6
-0.2
+0.2
-0.0
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.2
+0.6
+0.2
+0.0
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.7
-0.0
-0.2
+0.3
+0.1
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.3
+0.1
+0.6
-0.1
+0.1
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.3
+0.6
+0.3
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
+0.3
+0.4
+0.3
+0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.6
+0.3
+0.2
+0.0
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.0
+0.2
+0.7
+0.3
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.2
+0.2
+0.6
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.0
+0.6
+0.4
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
+0.4
+0.1
+0.4
+0.3
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.7
+0.2
+0.5
+0.2
+0.1
survival
Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.7
-0.3
+0.2
+0.9
+0.4
remove
IAI47_01230
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IAI47_01235
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IAI47_01240
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IAI47_01245
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IAI47_01250
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