Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_00945 and IAI47_00950 are separated by 48 nucleotidesIAI47_00950 and IAI47_00955 are separated by 362 nucleotidesIAI47_00955 and IAI47_00960 overlap by 56 nucleotidesIAI47_00960 and IAI47_00965 are separated by 396 nucleotides IAI47_00945: IAI47_00945 - YijD family membrane protein, at 202,052 to 202,405 _00945 IAI47_00950: IAI47_00950 - tRNA (uridine(54)-C5)-methyltransferase TrmA, at 202,454 to 203,557 _00950 IAI47_00955: IAI47_00955 - TonB-dependent vitamin B12 receptor BtuB, at 203,920 to 205,800 _00955 IAI47_00960: IAI47_00960 - glutamate racemase, at 205,745 to 206,596 _00960 IAI47_00965: IAI47_00965 - 16S ribosomal RNA, at 206,993 to 208,539 _00965
Group Condition IAI47_00945 IAI47_00950 IAI47_00955 IAI47_00960 IAI47_00965
carbon source Ying_Others16 rep A; time point 3 -1.1 -0.4 -0.2 N.D. N.D.
carbon source Ying_Others16 rep A; time point 1 -1.2 -0.2 -0.2 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.3 -0.0 -0.0 N.D. N.D.
carbon source Ying_Others16 rep B; time point 3 -0.6 -0.4 -0.3 N.D. N.D.
carbon source Ying_Others16 rep B; time point 2 -0.6 -0.3 -0.3 N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.2 -0.0 -0.0 N.D. N.D.
carbon source Ying_sugar7 rep C; time point 2 -0.8 -0.2 -0.1 N.D. N.D.
carbon source Ying_sugar7 rep B; time point 3 -0.8 -0.1 -0.3 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.1 +0.0 N.D. N.D.
carbon source Ying_Nucleobase14 rep B; time point 3 -0.4 -0.3 -0.4 N.D. N.D.
no stress control Defined media control, aerobic -1.0 +0.1 -0.2 N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 -0.8 -0.2 +0.0 N.D. N.D.
carbon source Ying_Nucleobase14 rep C; time point 3 -0.5 -0.2 -0.4 N.D. N.D.
carbon source Ying_Others16 rep C; time point 1 -0.5 -0.2 -0.2 N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 -0.1 +0.1 N.D. N.D.
carbon source Ying_Others16 rep C; time point 2 -0.4 -0.4 -0.2 N.D. N.D.
carbon source Ying_Nucleobase14 rep C; time point 2 -0.5 -0.1 -0.3 N.D. N.D.
stress Uranyl Acetate Dihydrate 200 uM, anaerobic -0.6 +0.1 -0.4 N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 2 -0.6 -0.2 +0.0 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 +0.1 -0.1 N.D. N.D.
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic +0.4 +0.1 -0.5 N.D. N.D.
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.5 +0.2 -0.3 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 -0.3 +0.1 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 -0.2 +0.0 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.9 -0.1 +0.0 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.9 -0.0 +0.0 N.D. N.D.
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.9 +0.1 -0.0 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.0 -0.1 +0.1 N.D. N.D.
stress copper (II) chloride 2 uM, anaerobic +0.9 +0.2 -0.1 N.D. N.D.
stress copper (II) chloride 2 uM, anaerobic +1.4 +0.3 -0.2 N.D. N.D.
remove
IAI47_00945
plot		 remove
IAI47_00950
plot		 remove
IAI47_00955		 remove
IAI47_00960
plot		 remove
IAI47_00965
plot