Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_00575 and IAI47_00580 are separated by 199 nucleotidesIAI47_00580 and IAI47_00585 are separated by 156 nucleotidesIAI47_00585 and IAI47_00590 are separated by 38 nucleotidesIAI47_00590 and IAI47_00595 are separated by 150 nucleotides IAI47_00575: IAI47_00575 - DUF4102 domain-containing protein, at 128,736 to 129,119 _00575 IAI47_00580: IAI47_00580 - YicC family protein, at 129,319 to 130,182 _00580 IAI47_00585: IAI47_00585 - DUF3574 domain-containing protein, at 130,339 to 130,764 _00585 IAI47_00590: IAI47_00590 - NupC/NupG family nucleoside CNT transporter, at 130,803 to 131,987 _00590 IAI47_00595: IAI47_00595 - ribonuclease PH, at 132,138 to 132,854 _00595
Group Condition IAI47_00575 IAI47_00580 IAI47_00585 IAI47_00590 IAI47_00595
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.6 -1.6 -0.1 +0.1
carbon source Ying_sugar7 rep A; time point 3 -0.1 -0.1 -0.3 +0.0 -1.2
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.8 -0.2 -0.0 -0.3
carbon source Ying_sugar7 rep C; time point 2 -0.3 -0.2 +0.0 -0.0 -0.7
no stress control Defined media control, aerobic -0.1 +0.2 -0.3 -0.0 -0.9
carbon source Ying_sugar7 rep C; time point 3 +0.1 -0.3 +0.3 +0.1 -1.3
nitrogen source Ammonium chloride (N) +0.1 +0.1 +0.1 -0.0 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.4 -0.1 +0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.2 +0.2 -0.5
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 +0.3 +0.1 +0.1 -1.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.0 +0.4 +0.1 +0.1 -1.3
carbon source Ying_AminoAcid20 rep A; time point 2 -0.1 +0.3 +0.2 +0.0 -1.0
carbon source Ying_AminoAcid20 rep A; time point 1 -0.0 +0.1 +0.2 +0.0 -1.0
carbon source Ying_AminoAcid20 rep C; time point 3 -0.0 +0.1 +0.2 +0.1 -1.0
carbon source Ying_sugar7 rep B; time point 3 +0.1 -0.3 +0.3 +0.1 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.3 +0.2 +0.1 -0.5
stress copper (II) chloride 2 uM, anaerobic -0.1 -0.8 +0.4 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +0.4 -0.1 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.5 +0.2 +0.1 +0.2
carbon source Ying_AminoAcid20 rep B; time point 2 -0.1 +0.3 +0.3 +0.1 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.6 +0.3 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 +0.3 +0.0 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.2 -0.2 -0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.8 +0.4 +0.0 +0.2 +0.0
no stress control Defined media control, aerobic +0.1 +0.2 +0.3 -0.1 -0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.1 +0.5 +0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.3 +0.3 +0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.6 +0.2 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.3 +0.3 +0.4 +0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.4 +0.5 +0.2 +0.2 +0.4
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IAI47_00575
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IAI47_00580
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IAI47_00590
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IAI47_00595
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