Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_00525 and IAI47_00530 overlap by 63 nucleotidesIAI47_00530 and IAI47_00535 are separated by 432 nucleotidesIAI47_00535 and IAI47_00540 are separated by 82 nucleotidesIAI47_00540 and IAI47_00545 are separated by 433 nucleotides IAI47_00525: IAI47_00525 - NAD-dependent DNA ligase LigB, at 119,306 to 121,057 _00525 IAI47_00530: IAI47_00530 - trimeric intracellular cation channel family protein, at 120,995 to 121,612 _00530 IAI47_00535: IAI47_00535 - oligosaccharide flippase family protein, at 122,045 to 122,689 _00535 IAI47_00540: IAI47_00540 - hypothetical protein, at 122,772 to 123,038 _00540 IAI47_00545: IAI47_00545 - polyketide cyclase, at 123,472 to 123,867 _00545
Group Condition IAI47_00525 IAI47_00530 IAI47_00535 IAI47_00540 IAI47_00545
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.0 -0.2 -2.8 -0.5
carbon source Ying_sugar7 rep C; time point 2 +0.1 +0.3 +0.2 -3.6 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.2 -1.7 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.1 -0.0 -2.1 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.0 -2.5 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 -0.3 -1.4 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.1 -0.1 -1.6 +0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.1 -0.4 -1.0 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.0 -0.0 -1.3 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 +0.0 -0.3 -1.2 +0.1
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 +0.1 +0.2 -1.5 -0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.0 +0.2 -0.9 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.1 -1.2 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.3 -0.7 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.3 -0.6 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.0 -0.5 -0.5 +0.1
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.0 -0.1 +0.3 -1.1 +0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic +0.1 +0.2 -0.2 -0.9 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.4 -0.6 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.1 -0.2 -0.7 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 -0.3 -0.6 -0.0
stress copper (II) chloride 2 uM, anaerobic -0.0 -0.0 +0.3 -0.8 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.0 +0.1 -0.2 +1.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.1 +0.0 -0.1 +1.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.0 +0.1 +1.3 +0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.0 +0.9 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.0 +1.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +0.1 +0.2 -0.0 +1.3 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +0.2 -0.0 -0.2 +1.8 -0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.0 +0.0 +1.6 +0.2
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