Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_00375 and IAI47_00380 overlap by 4 nucleotidesIAI47_00380 and IAI47_00385 are separated by 534 nucleotidesIAI47_00385 and IAI47_00390 are separated by 82 nucleotidesIAI47_00390 and IAI47_00395 are separated by 221 nucleotides IAI47_00375: IAI47_00375 - ribose operon transcriptional repressor RbsR, at 82,418 to 83,401 _00375 IAI47_00380: IAI47_00380 - multidrug transporter subunit MdtD, at 83,398 to 84,798 _00380 IAI47_00385: IAI47_00385 - 16S ribosomal RNA, at 85,333 to 86,879 _00385 IAI47_00390: IAI47_00390 - tRNA-Glu, at 86,962 to 87,036 _00390 IAI47_00395: IAI47_00395 - 23S ribosomal RNA, at 87,258 to 90,192 _00395
Group Condition IAI47_00375 IAI47_00380 IAI47_00385 IAI47_00390 IAI47_00395
carbon source Ying_all64 rep C; time point 3 -3.7 -0.0 N.D. N.D. N.D.
carbon source Ying_all64 rep B; time point 3 -3.7 +0.1 N.D. N.D. N.D.
carbon source Ying_all64 rep B; time point 2 -3.6 +0.1 N.D. N.D. N.D.
carbon source Ying_all64 rep A; time point 3 -3.6 +0.1 N.D. N.D. N.D.
carbon source Ying_all64 rep C; time point 2 -3.5 +0.2 N.D. N.D. N.D.
carbon source Ying_all64 rep A; time point 2 -3.4 +0.1 N.D. N.D. N.D.
carbon source Ying_all64 rep B; time point 1 -2.9 +0.1 N.D. N.D. N.D.
carbon source Ying_all64 rep A; time point 1 -2.8 +0.0 N.D. N.D. N.D.
carbon source Ying_all64 rep C; time point 1 -2.6 +0.1 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -2.1 +0.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -2.1 +0.0 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 -2.0 +0.0 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 -2.0 +0.0 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 -2.0 +0.0 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 2 -2.0 +0.1 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -2.0 +0.1 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 2 -1.9 +0.0 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 1 -2.0 +0.1 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -1.9 +0.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -1.9 +0.1 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 1 -1.9 +0.1 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -1.8 +0.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -1.8 +0.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -1.7 -0.0 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 1 -1.7 +0.0 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 -1.7 +0.1 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 +0.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -1.5 -0.0 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 -0.1 N.D. N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.7 +0.3 N.D. N.D. N.D.
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IAI47_00375
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IAI47_00380
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IAI47_00390
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IAI47_00395
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