Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_00195 and IAI47_00200 are separated by 17 nucleotidesIAI47_00200 and IAI47_00205 are separated by 539 nucleotidesIAI47_00205 and IAI47_00210 are separated by 1217 nucleotidesIAI47_00210 and IAI47_00215 are separated by 104 nucleotides IAI47_00195: IAI47_00195 - xylose isomerase, at 41,039 to 42,361 _00195 IAI47_00200: IAI47_00200 - xylulokinase, at 42,379 to 43,821 _00200 IAI47_00205: IAI47_00205 - hypothetical protein, at 44,361 to 44,846 _00205 IAI47_00210: IAI47_00210 - MFS transporter, at 46,064 to 47,305 _00210 IAI47_00215: IAI47_00215 - phosphate signaling complex protein PhoU, at 47,410 to 48,144 _00215
Group Condition IAI47_00195 IAI47_00200 IAI47_00205 IAI47_00210 IAI47_00215
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.4 -0.1 -0.6 N.D.
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.1 -0.0 -0.4 N.D.
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.2 -0.3 -0.5 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.0 -0.6 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.2 -0.2 +0.2 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.3 -0.1 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.3 -0.3 -0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.4 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.3 -0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.6 +0.1 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.4 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.4 -0.0 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.3 +0.1 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.4 +0.0 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.3 +0.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 +0.1 -0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 -0.3 +0.1 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.3 -0.4 -0.0 N.D.
nitrogen source Ammonium chloride (N) -0.2 +0.2 +0.2 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.4 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.2 -0.5 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.2 -0.3 +0.1 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.3 -0.4 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.2 -0.3 +0.0 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.3 +0.3 N.D.
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.0 +0.5 +0.2 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.3 +0.2 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.2 +0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.3 -0.2 +0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.3 -0.2 +0.2 N.D.
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IAI47_00195
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IAI47_00200
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IAI47_00210
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IAI47_00215
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